Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RBM28Q9NW13 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 AC008687.6-201ENST00000596318 630 ntBASIC23.16■■□□□ 1.3
RBM28Q9NW13 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.16■■□□□ 1.3
RBM28Q9NW13 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBM28Q9NW13 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBM28Q9NW13 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RBM28Q9NW13 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.15■■□□□ 1.3
RBM28Q9NW13 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
RBM28Q9NW13 AC120498.8-201ENST00000614275 531 ntBASIC23.15■■□□□ 1.3
RBM28Q9NW13 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
RBM28Q9NW13 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.15■■□□□ 1.3
RBM28Q9NW13 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RBM28Q9NW13 AL691432.2-201ENST00000607222 2038 ntBASIC23.15■■□□□ 1.3
RBM28Q9NW13 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RBM28Q9NW13 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RBM28Q9NW13 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RBM28Q9NW13 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RBM28Q9NW13 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RBM28Q9NW13 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RBM28Q9NW13 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.14■■□□□ 1.29
RBM28Q9NW13 AP003097.1-201ENST00000530657 1135 ntBASIC23.14■■□□□ 1.29
RBM28Q9NW13 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.14■■□□□ 1.29
RBM28Q9NW13 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RBM28Q9NW13 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.14■■□□□ 1.29
RBM28Q9NW13 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RBM28Q9NW13 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.14■■□□□ 1.29
RBM28Q9NW13 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.14■■□□□ 1.29
RBM28Q9NW13 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.14■■□□□ 1.29
RBM28Q9NW13 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RBM28Q9NW13 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
RBM28Q9NW13 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.13■■□□□ 1.29
RBM28Q9NW13 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.13■■□□□ 1.29
RBM28Q9NW13 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.13■■□□□ 1.29
RBM28Q9NW13 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
RBM28Q9NW13 AC026366.1-201ENST00000488803 879 ntBASIC23.13■■□□□ 1.29
RBM28Q9NW13 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.13■■□□□ 1.29
RBM28Q9NW13 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.13■■□□□ 1.29
RBM28Q9NW13 AC008403.3-201ENST00000598924 454 ntBASIC23.13■■□□□ 1.29
RBM28Q9NW13 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.13■■□□□ 1.29
RBM28Q9NW13 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RBM28Q9NW13 PHGDH-210ENST00000641115 1638 ntBASIC23.12■■□□□ 1.29
RBM28Q9NW13 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RBM28Q9NW13 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 RPS2P52-201ENST00000469610 820 ntBASIC23.12■■□□□ 1.29
RBM28Q9NW13 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RBM28Q9NW13 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RBM28Q9NW13 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RBM28Q9NW13 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.12■■□□□ 1.29
RBM28Q9NW13 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
RBM28Q9NW13 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.11■■□□□ 1.29
RBM28Q9NW13 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.11■■□□□ 1.29
RBM28Q9NW13 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.11■■□□□ 1.29
RBM28Q9NW13 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.11■■□□□ 1.29
RBM28Q9NW13 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
RBM28Q9NW13 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
RBM28Q9NW13 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RBM28Q9NW13 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.1■■□□□ 1.29
RBM28Q9NW13 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RBM28Q9NW13 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBM28Q9NW13 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RBM28Q9NW13 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms