Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.98■□□□□ 0.63
PIF1Q9H611 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.98■□□□□ 0.63
PIF1Q9H611 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PIF1Q9H611 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
PIF1Q9H611 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 AC007322.3-201ENST00000426526 701 ntBASIC18.98■□□□□ 0.63
PIF1Q9H611 AC097381.1-201ENST00000429019 1296 ntBASIC18.98■□□□□ 0.63
PIF1Q9H611 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.98■□□□□ 0.63
PIF1Q9H611 TERF1P2-201ENST00000583350 1212 ntBASIC18.98■□□□□ 0.63
PIF1Q9H611 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.98■□□□□ 0.63
PIF1Q9H611 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.98■□□□□ 0.63
PIF1Q9H611 MIR6821-201ENST00000617625 74 ntBASIC18.98■□□□□ 0.63
PIF1Q9H611 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.98■□□□□ 0.63
PIF1Q9H611 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.98■□□□□ 0.63
PIF1Q9H611 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
PIF1Q9H611 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
PIF1Q9H611 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
PIF1Q9H611 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 BX323043.1-201ENST00000641006 1765 ntBASIC18.97■□□□□ 0.63
PIF1Q9H611 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PIF1Q9H611 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.97■□□□□ 0.63
PIF1Q9H611 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.97■□□□□ 0.63
PIF1Q9H611 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.97■□□□□ 0.63
PIF1Q9H611 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.97■□□□□ 0.63
PIF1Q9H611 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PIF1Q9H611 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PIF1Q9H611 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.97■□□□□ 0.63
PIF1Q9H611 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PIF1Q9H611 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PIF1Q9H611 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.97■□□□□ 0.63
PIF1Q9H611 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PIF1Q9H611 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.97■□□□□ 0.63
PIF1Q9H611 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.96■□□□□ 0.63
PIF1Q9H611 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.96■□□□□ 0.63
PIF1Q9H611 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PIF1Q9H611 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.96■□□□□ 0.63
PIF1Q9H611 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.96■□□□□ 0.63
PIF1Q9H611 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.96■□□□□ 0.63
PIF1Q9H611 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.96■□□□□ 0.63
PIF1Q9H611 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PIF1Q9H611 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PIF1Q9H611 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PIF1Q9H611 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
PIF1Q9H611 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.96■□□□□ 0.63
PIF1Q9H611 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.96■□□□□ 0.63
PIF1Q9H611 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PIF1Q9H611 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PIF1Q9H611 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PIF1Q9H611 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.95■□□□□ 0.62
PIF1Q9H611 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
PIF1Q9H611 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PIF1Q9H611 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.95■□□□□ 0.62
PIF1Q9H611 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.95■□□□□ 0.62
PIF1Q9H611 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TREX1-205ENST00000625293 1783 ntBASIC18.95■□□□□ 0.62
PIF1Q9H611 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms