Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHMP4BQ9H444 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.14■■□□□ 1.62
CHMP4BQ9H444 MIR4758-201ENST00000577688 71 ntBASIC25.14■■□□□ 1.62
CHMP4BQ9H444 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC25.14■■□□□ 1.61
CHMP4BQ9H444 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.14■■□□□ 1.61
CHMP4BQ9H444 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
CHMP4BQ9H444 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHMP4BQ9H444 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 TSPY6P-201ENST00000448518 926 ntBASIC25.13■■□□□ 1.61
CHMP4BQ9H444 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CHMP4BQ9H444 AC092666.2-201ENST00000613287 246 ntBASIC25.13■■□□□ 1.61
CHMP4BQ9H444 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 AL390719.1-204ENST00000412397 1219 ntBASIC25.12■■□□□ 1.61
CHMP4BQ9H444 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 AC073210.2-201ENST00000430369 194 ntBASIC25.12■■□□□ 1.61
CHMP4BQ9H444 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC25.12■■□□□ 1.61
CHMP4BQ9H444 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
CHMP4BQ9H444 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 DUSP5P2-201ENST00000426873 1033 ntBASIC25.1■■□□□ 1.61
CHMP4BQ9H444 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHMP4BQ9H444 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 PHGDH-210ENST00000641115 1638 ntBASIC25.09■■□□□ 1.61
CHMP4BQ9H444 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 AC091874.3-201ENST00000512672 1195 ntBASIC25.09■■□□□ 1.61
CHMP4BQ9H444 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.09■■□□□ 1.61
CHMP4BQ9H444 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms