Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM54Q9BYV2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
TRIM54Q9BYV2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM54Q9BYV2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM54Q9BYV2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 MKRN4P-201ENST00000444706 1521 ntBASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRIM54Q9BYV2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 MIR663A-201ENST00000385250 93 ntBASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 AC006970.2-201ENST00000450065 779 ntBASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRIM54Q9BYV2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.64■□□□□ 0.74
TRIM54Q9BYV2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM54Q9BYV2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRIM54Q9BYV2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRIM54Q9BYV2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 AC112907.3-201ENST00000577781 2400 ntBASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM54Q9BYV2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 C2orf69P4-201ENST00000565394 541 ntBASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 RAP2CP1-201ENST00000605103 478 ntBASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 AL121832.2-201ENST00000610979 668 ntBASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM54Q9BYV2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM54Q9BYV2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM54Q9BYV2 KRT17P1-201ENST00000399211 1546 ntBASIC19.61■□□□□ 0.73
TRIM54Q9BYV2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM54Q9BYV2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM54Q9BYV2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms