Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCGF1Q9BSM1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 AP003097.1-201ENST00000530657 1135 ntBASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 PNMA6B-201ENST00000538162 1200 ntBASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 ITM2C-210ENST00000620962 501 ntBASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 AC027702.1-201ENST00000563810 1770 ntBASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCGF1Q9BSM1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 AC026366.1-201ENST00000488803 879 ntBASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCGF1Q9BSM1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
PCGF1Q9BSM1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 FEM1AP1-201ENST00000431297 1995 ntBASIC16.64■□□□□ 0.25
PCGF1Q9BSM1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCGF1Q9BSM1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms