Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HDHD3Q9BSH5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 BX323043.1-201ENST00000641006 1765 ntBASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 PGM5P4-201ENST00000421970 445 ntBASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HDHD3Q9BSH5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 AC016405.3-201ENST00000607710 860 ntBASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HDHD3Q9BSH5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 TERF1P5-201ENST00000477545 1207 ntBASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 AC010536.3-201ENST00000620306 533 ntBASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 AC120498.9-201ENST00000339021 3867 ntBASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 PTBP1P-201ENST00000554374 1601 ntBASIC16.78■□□□□ 0.28
HDHD3Q9BSH5 AC004408.2-201ENST00000623613 2777 ntBASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 AL591742.1-201ENST00000604433 565 ntBASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HDHD3Q9BSH5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HDHD3Q9BSH5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms