Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TM9SF2Q99805 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 MCRIP2P1-201ENST00000394346 511 ntBASIC18.42■□□□□ 0.54
TM9SF2Q99805 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 AC091874.3-201ENST00000512672 1195 ntBASIC18.42■□□□□ 0.54
TM9SF2Q99805 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TM9SF2Q99805 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TM9SF2Q99805 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 FAM201B-201ENST00000458407 597 ntBASIC18.41■□□□□ 0.54
TM9SF2Q99805 RNA5SP413-201ENST00000516373 109 ntBASIC18.41■□□□□ 0.54
TM9SF2Q99805 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TM9SF2Q99805 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF2Q99805 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 AL020996.1-203ENST00000536896 2307 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 AC116050.2-201ENST00000612102 1779 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 DUSP5P2-201ENST00000426873 1033 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 TSPY20P-201ENST00000450910 630 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 CYP2T3P-201ENST00000601990 817 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 AL589743.5-201ENST00000616611 1050 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 TMEM191A-211ENST00000637163 1067 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 AC099778.1-201ENST00000568593 1911 ntBASIC18.4■□□□□ 0.54
TM9SF2Q99805 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF2Q99805 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TM9SF2Q99805 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
TM9SF2Q99805 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TM9SF2Q99805 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
TM9SF2Q99805 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF2Q99805 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.39■□□□□ 0.53
TM9SF2Q99805 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms