Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP1Q96SZ6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDK5RAP1Q96SZ6 SMG8-203ENST00000578922 2178 ntBASIC20.7■□□□□ 0.91
CDK5RAP1Q96SZ6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 AC004264.1-201ENST00000608354 794 ntBASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 AL135905.2-201ENST00000584934 1404 ntBASIC20.7■□□□□ 0.9
CDK5RAP1Q96SZ6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 NBPF21P-201ENST00000425093 1451 ntBASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 AC008550.1-201ENST00000511500 884 ntBASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP1Q96SZ6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 AC116351.2-201ENST00000606540 1585 ntBASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 AP005212.1-201ENST00000581547 1997 ntBASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.68■□□□□ 0.9
CDK5RAP1Q96SZ6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 RPS2P4-201ENST00000476944 856 ntBASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 BX119927.1-201ENST00000636596 1552 ntBASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 PHGDH-210ENST00000641115 1638 ntBASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.67■□□□□ 0.9
CDK5RAP1Q96SZ6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms