Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC022898.2-201ENST00000616822 1312 ntBASIC19.08■□□□□ 0.65
CNTNAP3BQ96NU0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNTNAP3BQ96NU0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 HMGN1P19-201ENST00000436976 333 ntBASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 AP005242.2-201ENST00000580065 1175 ntBASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 AC130371.2-201ENST00000619443 611 ntBASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 AC011558.1-201ENST00000623459 338 ntBASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNTNAP3BQ96NU0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 HLA-G-203ENST00000376818 1127 ntBASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNTNAP3BQ96NU0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 EP400NL-214ENST00000641289 2402 ntBASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 LINC01960-201ENST00000563759 1884 ntBASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 ATP5G2P1-201ENST00000433580 426 ntBASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 AL359075.1-203ENST00000462729 1002 ntBASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CNTNAP3BQ96NU0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 NIFKP9-201ENST00000419265 221 ntBASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 UNC93B7-201ENST00000509439 705 ntBASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 MIR3652-201ENST00000579335 131 ntBASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 AC117500.6-201ENST00000624871 588 ntBASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CNTNAP3BQ96NU0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 HOMER2P1-201ENST00000455653 964 ntBASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNTNAP3BQ96NU0 VENTXP5-201ENST00000523979 775 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms