Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.26■□□□□ 0.99
ZNF558Q96NG5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF558Q96NG5 AL031985.4-201ENST00000642138 673 ntBASIC21.26■□□□□ 0.99
ZNF558Q96NG5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF558Q96NG5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF558Q96NG5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF558Q96NG5 KRT18P22-201ENST00000402024 1347 ntBASIC21.26■□□□□ 0.99
ZNF558Q96NG5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF558Q96NG5 CYP2D8P-201ENST00000433633 1490 ntBASIC21.26■□□□□ 0.99
ZNF558Q96NG5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
ZNF558Q96NG5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 AC113347.1-201ENST00000413321 391 ntBASIC21.25■□□□□ 0.99
ZNF558Q96NG5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 C1QL1P1-201ENST00000568105 661 ntBASIC21.25■□□□□ 0.99
ZNF558Q96NG5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 AL590326.2-201ENST00000625139 305 ntBASIC21.25■□□□□ 0.99
ZNF558Q96NG5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF558Q96NG5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 ARMC10P1-201ENST00000313754 855 ntBASIC21.24■□□□□ 0.99
ZNF558Q96NG5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 AC010947.1-201ENST00000623454 693 ntBASIC21.24■□□□□ 0.99
ZNF558Q96NG5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF558Q96NG5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 FP700111.2-201ENST00000619190 1892 ntBASIC21.23■□□□□ 0.99
ZNF558Q96NG5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 AC005229.4-201ENST00000610085 2198 ntBASIC21.23■□□□□ 0.99
ZNF558Q96NG5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF558Q96NG5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 DPP3P2-201ENST00000416030 1696 ntBASIC21.22■□□□□ 0.99
ZNF558Q96NG5 AC012676.1-201ENST00000574705 1949 ntBASIC21.22■□□□□ 0.99
ZNF558Q96NG5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 KRT18P57-201ENST00000443599 1254 ntBASIC21.22■□□□□ 0.99
ZNF558Q96NG5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZNF558Q96NG5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 AL137013.1-201ENST00000432946 1228 ntBASIC21.21■□□□□ 0.99
ZNF558Q96NG5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 AL445675.2-201ENST00000620291 557 ntBASIC21.21■□□□□ 0.99
ZNF558Q96NG5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ZNF558Q96NG5 AC116351.2-201ENST00000606540 1585 ntBASIC21.21■□□□□ 0.99
ZNF558Q96NG5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms