Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 AC124283.5-201ENST00000624661 1809 ntBASIC16.22■□□□□ 0.19
ZNF48Q96MX3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 PRKY-204ENST00000533551 1019 ntBASIC16.22■□□□□ 0.19
ZNF48Q96MX3 RARRES2P10-201ENST00000564312 460 ntBASIC16.22■□□□□ 0.19
ZNF48Q96MX3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.22■□□□□ 0.19
ZNF48Q96MX3 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.22■□□□□ 0.19
ZNF48Q96MX3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF48Q96MX3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 LINC01521-201ENST00000504184 1943 ntBASIC16.21■□□□□ 0.19
ZNF48Q96MX3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 AL135905.2-201ENST00000584934 1404 ntBASIC16.21■□□□□ 0.19
ZNF48Q96MX3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 AC023632.3-201ENST00000521633 145 ntBASIC16.21■□□□□ 0.19
ZNF48Q96MX3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 AP001412.1-201ENST00000608405 714 ntBASIC16.21■□□□□ 0.19
ZNF48Q96MX3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 AC121338.2-201ENST00000622535 1744 ntBASIC16.21■□□□□ 0.19
ZNF48Q96MX3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF48Q96MX3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
ZNF48Q96MX3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF48Q96MX3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF48Q96MX3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF48Q96MX3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF48Q96MX3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF48Q96MX3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ZNF48Q96MX3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF48Q96MX3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF48Q96MX3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms