Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 DPP3P2-201ENST00000416030 1696 ntBASIC16.76■□□□□ 0.27
TIMD4Q96H15 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 RPS2P4-201ENST00000476944 856 ntBASIC16.76■□□□□ 0.27
TIMD4Q96H15 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.76■□□□□ 0.27
TIMD4Q96H15 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TIMD4Q96H15 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMD4Q96H15 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 AC005229.4-201ENST00000610085 2198 ntBASIC16.75■□□□□ 0.27
TIMD4Q96H15 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMD4Q96H15 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 KRASP1-201ENST00000407852 552 ntBASIC16.75■□□□□ 0.27
TIMD4Q96H15 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMD4Q96H15 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 AC110285.5-201ENST00000611501 352 ntBASIC16.75■□□□□ 0.27
TIMD4Q96H15 KRT16P6-202ENST00000425692 1426 ntBASIC16.75■□□□□ 0.27
TIMD4Q96H15 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMD4Q96H15 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMD4Q96H15 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMD4Q96H15 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMD4Q96H15 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 AC133681.1-201ENST00000465482 601 ntBASIC16.74■□□□□ 0.27
TIMD4Q96H15 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 AC008550.1-201ENST00000511500 884 ntBASIC16.74■□□□□ 0.27
TIMD4Q96H15 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TIMD4Q96H15 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMD4Q96H15 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMD4Q96H15 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMD4Q96H15 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMD4Q96H15 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.73■□□□□ 0.27
TIMD4Q96H15 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMD4Q96H15 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMD4Q96H15 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMD4Q96H15 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMD4Q96H15 AL135905.2-201ENST00000584934 1404 ntBASIC16.73■□□□□ 0.27
TIMD4Q96H15 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMD4Q96H15 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMD4Q96H15 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMD4Q96H15 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.73■□□□□ 0.27
TIMD4Q96H15 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms