Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 AC116351.2-201ENST00000606540 1585 ntBASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 AC133681.1-201ENST00000465482 601 ntBASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 RPPH1-201ENST00000516869 333 ntBASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 C1QBPP2-201ENST00000528754 825 ntBASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 AC142381.4-202ENST00000563973 229 ntBASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 LINC01521-201ENST00000504184 1943 ntBASIC19.96■□□□□ 0.79
ECHDC3Q96DC8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 PHGDH-210ENST00000641115 1638 ntBASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 AC124016.1-201ENST00000609552 612 ntBASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 AL023875.1-201ENST00000640777 796 ntBASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.95■□□□□ 0.78
ECHDC3Q96DC8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 AC099778.1-201ENST00000568593 1911 ntBASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ECHDC3Q96DC8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC3Q96DC8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms