Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 AL390719.1-204ENST00000412397 1219 ntBASIC18.79■□□□□ 0.6
TM9SF4Q92544 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TM9SF4Q92544 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TM9SF4Q92544 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 PCDHAC2-203ENST00000615316 3011 ntBASIC18.78■□□□□ 0.6
TM9SF4Q92544 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TM9SF4Q92544 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TM9SF4Q92544 AFG3L1P-217ENST00000557444 2447 ntBASIC18.78■□□□□ 0.6
TM9SF4Q92544 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF4Q92544 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF4Q92544 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF4Q92544 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF4Q92544 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF4Q92544 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TM9SF4Q92544 AP001412.1-201ENST00000608405 714 ntBASIC18.77■□□□□ 0.6
TM9SF4Q92544 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.77■□□□□ 0.6
TM9SF4Q92544 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM9SF4Q92544 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TM9SF4Q92544 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TM9SF4Q92544 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 AC006128.1-201ENST00000624704 1661 ntBASIC18.76■□□□□ 0.59
TM9SF4Q92544 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 PLK5-205ENST00000642079 1969 ntBASIC18.76■□□□□ 0.59
TM9SF4Q92544 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.76■□□□□ 0.59
TM9SF4Q92544 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TM9SF4Q92544 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TM9SF4Q92544 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms