Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RAB40AQ8WXH6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 RAP2CP1-201ENST00000605103 478 ntBASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 AC008175.2-201ENST00000612840 297 ntBASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RAB40AQ8WXH6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB40AQ8WXH6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.38
RAB40AQ8WXH6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
RAB40AQ8WXH6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.46■□□□□ 0.38
RAB40AQ8WXH6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 AC120498.10-201ENST00000621827 505 ntBASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 MIR2861-201ENST00000636310 90 ntBASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms