Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.19■□□□□ 0.5
CNIH3Q8TBE1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CNIH3Q8TBE1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CNIH3Q8TBE1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CNIH3Q8TBE1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNIH3Q8TBE1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms