Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 AL512625.2-201ENST00000417533 625 ntBASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DNAAF3Q8N9W5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DNAAF3Q8N9W5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 PTBP1P-201ENST00000554374 1601 ntBASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 KRT8P17-201ENST00000453110 1448 ntBASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.27■□□□□ 0.83
DNAAF3Q8N9W5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 AC138932.1-201ENST00000534164 6830 ntBASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DNAAF3Q8N9W5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 CDCA4P2-201ENST00000441182 718 ntBASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 KRT17P1-201ENST00000399211 1546 ntBASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
DNAAF3Q8N9W5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 AC026185.1-201ENST00000445748 174 ntBASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 AC133552.2-202ENST00000575694 574 ntBASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 KRT8P20-201ENST00000423953 1409 ntBASIC20.24■□□□□ 0.83
DNAAF3Q8N9W5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms