Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC89Q8N998 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CCDC89Q8N998 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC89Q8N998 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC89Q8N998 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCDC89Q8N998 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC89Q8N998 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
CCDC89Q8N998 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC89Q8N998 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC89Q8N998 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC89Q8N998 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC89Q8N998 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC89Q8N998 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC89Q8N998 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC89Q8N998 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC89Q8N998 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC89Q8N998 MIR6821-201ENST00000617625 74 ntBASIC20.64■□□□□ 0.89
CCDC89Q8N998 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC89Q8N998 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC89Q8N998 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC89Q8N998 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 AC016405.3-201ENST00000607710 860 ntBASIC20.63■□□□□ 0.89
CCDC89Q8N998 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCDC89Q8N998 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC89Q8N998 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC89Q8N998 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC89Q8N998 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC89Q8N998 AC087623.3-201ENST00000607047 1098 ntBASIC20.62■□□□□ 0.89
CCDC89Q8N998 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC89Q8N998 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC89Q8N998 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC89Q8N998 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC89Q8N998 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC89Q8N998 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.61■□□□□ 0.89
CCDC89Q8N998 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 TREX1-205ENST00000625293 1783 ntBASIC20.61■□□□□ 0.89
CCDC89Q8N998 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC89Q8N998 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC89Q8N998 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.6■□□□□ 0.89
CCDC89Q8N998 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CCDC89Q8N998 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC89Q8N998 AC016769.1-201ENST00000409132 1010 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms