Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LSMEM1Q8N8F7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 AC125437.2-201ENST00000625180 2167 ntBASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 CDCA4P2-201ENST00000441182 718 ntBASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 C2orf69P4-201ENST00000565394 541 ntBASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 IKBKGP1-201ENST00000612193 1073 ntBASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LSMEM1Q8N8F7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 KRT16P6-202ENST00000425692 1426 ntBASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 AC023632.3-201ENST00000521633 145 ntBASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 KRT17P1-201ENST00000399211 1546 ntBASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LSMEM1Q8N8F7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 HLA-G-202ENST00000376815 851 ntBASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 HLA-G-203ENST00000376818 1127 ntBASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 RAP2CP1-201ENST00000605103 478 ntBASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 AL137784.2-201ENST00000607332 1000 ntBASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.22■□□□□ 0.51
LSMEM1Q8N8F7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 MIR935-201ENST00000401179 91 ntBASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 AC026185.1-201ENST00000445748 174 ntBASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms