Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 AC099778.1-201ENST00000568593 1911 ntBASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 AC233263.1-201ENST00000578059 224 ntBASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 AL121829.2-201ENST00000620908 328 ntBASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 AL121906.2-201ENST00000621597 723 ntBASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAM1L1Q8N609 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 PHGDH-210ENST00000641115 1638 ntBASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAM1L1Q8N609 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAM1L1Q8N609 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 MTDHP1-201ENST00000605323 784 ntBASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 TMEM191A-211ENST00000637163 1067 ntBASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 AC116351.2-201ENST00000606540 1585 ntBASIC19.7■□□□□ 0.74
TRAM1L1Q8N609 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRAM1L1Q8N609 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms