Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC71Q8IV32 AP000974.1-201ENST00000623909 2387 ntBASIC18.66■□□□□ 0.58
CCDC71Q8IV32 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 AC061975.6-201ENST00000579045 1553 ntBASIC18.65■□□□□ 0.58
CCDC71Q8IV32 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC71Q8IV32 RBM17P2-201ENST00000616397 1405 ntBASIC18.65■□□□□ 0.58
CCDC71Q8IV32 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC71Q8IV32 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 AL591742.1-201ENST00000604433 565 ntBASIC18.64■□□□□ 0.57
CCDC71Q8IV32 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 KRT16P2-201ENST00000414673 1423 ntBASIC18.64■□□□□ 0.57
CCDC71Q8IV32 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC71Q8IV32 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 AC093827.2-201ENST00000512654 315 ntBASIC18.63■□□□□ 0.57
CCDC71Q8IV32 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 ITM2C-210ENST00000620962 501 ntBASIC18.63■□□□□ 0.57
CCDC71Q8IV32 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC71Q8IV32 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 AC097658.1-201ENST00000475555 843 ntBASIC18.62■□□□□ 0.57
CCDC71Q8IV32 RARRES2P4-201ENST00000514074 484 ntBASIC18.62■□□□□ 0.57
CCDC71Q8IV32 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 AC083880.1-201ENST00000608266 535 ntBASIC18.62■□□□□ 0.57
CCDC71Q8IV32 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71Q8IV32 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms