Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 AL512408.1-201ENST00000569378 2000 ntBASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 BX119927.1-201ENST00000636596 1552 ntBASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LRRTM4Q86VH4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 AL158047.1-201ENST00000445918 881 ntBASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 RPPH1-201ENST00000516869 333 ntBASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 AL359736.2-201ENST00000621992 437 ntBASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LRRTM4Q86VH4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 FAM197Y4-202ENST00000622692 608 ntBASIC19.55■□□□□ 0.72
LRRTM4Q86VH4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 AC092667.1-201ENST00000434301 2586 ntBASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 AC239809.2-201ENST00000415381 517 ntBASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 AL023875.1-201ENST00000640777 796 ntBASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRTM4Q86VH4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 AL162377.1-201ENST00000618844 1793 ntBASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRRTM4Q86VH4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms