Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 TSPY14P-201ENST00000303979 915 ntBASIC20.64■□□□□ 0.89
DENND4AQ7Z401 LIN28AP1-201ENST00000429574 405 ntBASIC20.64■□□□□ 0.89
DENND4AQ7Z401 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.64■□□□□ 0.89
DENND4AQ7Z401 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
DENND4AQ7Z401 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 CRYGFP-201ENST00000418459 633 ntBASIC20.62■□□□□ 0.89
DENND4AQ7Z401 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 AC011506.1-201ENST00000474329 610 ntBASIC20.62■□□□□ 0.89
DENND4AQ7Z401 AC128688.1-201ENST00000487626 519 ntBASIC20.62■□□□□ 0.89
DENND4AQ7Z401 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DENND4AQ7Z401 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DENND4AQ7Z401 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
DENND4AQ7Z401 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 AC117947.1-201ENST00000427448 529 ntBASIC20.59■□□□□ 0.89
DENND4AQ7Z401 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.59■□□□□ 0.89
DENND4AQ7Z401 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.58■□□□□ 0.89
DENND4AQ7Z401 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DENND4AQ7Z401 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DENND4AQ7Z401 UPK3BP1-201ENST00000428678 509 ntBASIC20.58■□□□□ 0.89
DENND4AQ7Z401 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.58■□□□□ 0.89
DENND4AQ7Z401 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms