Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 UNC93B5-201ENST00000530315 699 ntBASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 SOX15-203ENST00000570788 1093 ntBASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LYSMD3Q7Z3D4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LYSMD3Q7Z3D4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.02■□□□□ 0.79
LYSMD3Q7Z3D4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
LYSMD3Q7Z3D4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.02■□□□□ 0.79
LYSMD3Q7Z3D4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
LYSMD3Q7Z3D4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 TSPY20P-201ENST00000450910 630 ntBASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 AC112907.3-201ENST00000577781 2400 ntBASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LYSMD3Q7Z3D4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 MIR4651-201ENST00000582622 73 ntBASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LYSMD3Q7Z3D4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LYSMD3Q7Z3D4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LYSMD3Q7Z3D4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms