Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC10.73□□□□□ -0.69
LCA10Q71F78 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
LCA10Q71F78 RNF146-205ENST00000477776 762 ntTSL 3 BASIC10.73□□□□□ -0.69
LCA10Q71F78 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 MTDHP2-201ENST00000601468 714 ntBASIC10.73□□□□□ -0.69
LCA10Q71F78 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC10.73□□□□□ -0.69
LCA10Q71F78 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC10.73□□□□□ -0.69
LCA10Q71F78 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC10.73□□□□□ -0.69
LCA10Q71F78 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
LCA10Q71F78 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
LCA10Q71F78 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
LCA10Q71F78 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 KRT125P-201ENST00000546827 989 ntBASIC10.72□□□□□ -0.69
LCA10Q71F78 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 AC092028.1-203ENST00000608262 953 ntBASIC10.72□□□□□ -0.69
LCA10Q71F78 CA15P2-201ENST00000611168 834 ntBASIC10.72□□□□□ -0.69
LCA10Q71F78 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.72□□□□□ -0.69
LCA10Q71F78 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LCA10Q71F78 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
LCA10Q71F78 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC10.71□□□□□ -0.69
LCA10Q71F78 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LCA10Q71F78 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 CD72-202ENST00000378430 585 ntTSL 3 BASIC10.71□□□□□ -0.69
LCA10Q71F78 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
LCA10Q71F78 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC10.71□□□□□ -0.69
LCA10Q71F78 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC10.71□□□□□ -0.69
LCA10Q71F78 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 PRTG-204ENST00000561292 833 ntTSL 3 BASIC10.71□□□□□ -0.69
LCA10Q71F78 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LCA10Q71F78 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
LCA10Q71F78 ME2-206ENST00000638410 2289 ntTSL 5 BASIC10.71□□□□□ -0.69
LCA10Q71F78 ME2-210ENST00000639255 2262 ntTSL 5 BASIC10.71□□□□□ -0.69
LCA10Q71F78 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LCA10Q71F78 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
LCA10Q71F78 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LCA10Q71F78 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms