Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST2H3AQ71DI3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST2H3AQ71DI3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 BX276092.2-201ENST00000417668 665 ntBASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 AC083906.2-201ENST00000511578 360 ntBASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 AL121832.2-201ENST00000610979 668 ntBASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIST2H3AQ71DI3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 AFG3L1P-217ENST00000557444 2447 ntBASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 KRT16P6-202ENST00000425692 1426 ntBASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HIST2H3AQ71DI3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 HLA-G-202ENST00000376815 851 ntBASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 HLA-G-203ENST00000376818 1127 ntBASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 GPX1P1-201ENST00000388829 606 ntBASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 MIPEPP3-201ENST00000412105 444 ntBASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 NCF1B-203ENST00000435988 1254 ntBASIC17.46■□□□□ 0.39
HIST2H3AQ71DI3 GUSBP6-202ENST00000438529 1198 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms