Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 AC121338.2-201ENST00000622535 1744 ntBASIC20.7■□□□□ 0.9
FOXR1Q6PIV2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 KRT87P-202ENST00000534226 1464 ntBASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 AC083906.2-201ENST00000511578 360 ntBASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 AL121832.2-201ENST00000610979 668 ntBASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXR1Q6PIV2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 AC005224.4-201ENST00000583262 1652 ntBASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 AC007322.1-201ENST00000426983 750 ntBASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 TSPY20P-201ENST00000450910 630 ntBASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 UBE2DNL-204ENST00000602536 740 ntBASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXR1Q6PIV2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXR1Q6PIV2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 AC005181.1-201ENST00000604782 1256 ntBASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXR1Q6PIV2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms