Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LPCAT4Q643R3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 AP000997.3-201ENST00000623333 2250 ntBASIC18.77■□□□□ 0.6
LPCAT4Q643R3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 RARRES2P1-201ENST00000474487 481 ntBASIC18.77■□□□□ 0.6
LPCAT4Q643R3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LPCAT4Q643R3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.59
LPCAT4Q643R3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LPCAT4Q643R3 AC135050.7-201ENST00000624508 2218 ntBASIC18.77■□□□□ 0.59
LPCAT4Q643R3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.77■□□□□ 0.59
LPCAT4Q643R3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.77■□□□□ 0.59
LPCAT4Q643R3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LPCAT4Q643R3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 AC009237.3-201ENST00000393279 1427 ntBASIC18.75■□□□□ 0.59
LPCAT4Q643R3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 AC079598.2-202ENST00000546624 1451 ntBASIC18.75■□□□□ 0.59
LPCAT4Q643R3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
LPCAT4Q643R3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
LPCAT4Q643R3 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms