Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 AL671277.2-201ENST00000458060 996 ntBASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 AP000692.2-201ENST00000608391 879 ntBASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
SNAPC4Q5SXM2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 AC141257.4-201ENST00000634557 245 ntBASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 AC136944.6-201ENST00000634818 245 ntBASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SNAPC4Q5SXM2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
SNAPC4Q5SXM2 MFAP1P1-201ENST00000442257 1255 ntBASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 HLA-G-202ENST00000376815 851 ntBASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 HLA-G-203ENST00000376818 1127 ntBASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 AC007663.1-201ENST00000438948 1240 ntBASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 AC011558.1-201ENST00000623459 338 ntBASIC32.8■■■□□ 2.84
SNAPC4Q5SXM2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 AC116562.4-202ENST00000641738 218 ntBASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC32.79■■■□□ 2.84
SNAPC4Q5SXM2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 AC010653.2-201ENST00000623505 997 ntBASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNAPC4Q5SXM2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 AC008622.2-201ENST00000617006 1229 ntBASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SNAPC4Q5SXM2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 AC246785.2-201ENST00000432512 513 ntBASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 AC008040.2-201ENST00000461049 708 ntBASIC32.76■■■□□ 2.84
SNAPC4Q5SXM2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC32.75■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms