Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.67■□□□□ 0.74
CTSL3PQ5NE16 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTSL3PQ5NE16 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 HLA-L-209ENST00000420110 1011 ntBASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 AC069152.1-201ENST00000438030 544 ntBASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 AC097658.1-201ENST00000475555 843 ntBASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CTSL3PQ5NE16 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 AC073210.2-201ENST00000430369 194 ntBASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.65■□□□□ 0.74
CTSL3PQ5NE16 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTSL3PQ5NE16 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CTSL3PQ5NE16 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.64■□□□□ 0.74
CTSL3PQ5NE16 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 AC005829.2-201ENST00000571422 1056 ntBASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTSL3PQ5NE16 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 AC009237.14-201ENST00000609975 1594 ntBASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 AL355802.2-201ENST00000402069 882 ntBASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 AC133041.1-202ENST00000642053 222 ntBASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.63■□□□□ 0.73
CTSL3PQ5NE16 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTSL3PQ5NE16 PHGDH-210ENST00000641115 1638 ntBASIC19.62■□□□□ 0.73
CTSL3PQ5NE16 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSL3PQ5NE16 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTSL3PQ5NE16 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.62■□□□□ 0.73
CTSL3PQ5NE16 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CTSL3PQ5NE16 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms