Protein–RNA interactions for Protein: Q3E7C1

TFB5, General transcription and DNA repair factor IIH subunit TFB5, yeastyeast

Predicted RBP Predictions only

Length 72 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFB5Q3E7C1 tM(CAU)Q2tM(CAU)Q2 78 nt-0.46□□□□□ -2.48
TFB5Q3E7C1 YGR146C-AYGR146C-A 162 nt-0.51□□□□□ -2.49
TFB5Q3E7C1 YML100W-AYML100W-A 174 nt-0.53□□□□□ -2.49
TFB5Q3E7C1 snR39BsnR39B 96 nt-0.54□□□□□ -2.5
TFB5Q3E7C1 snR69snR69 101 nt-0.55□□□□□ -2.5
TFB5Q3E7C1 TFB5YDR079C-A 219 nt-0.55□□□□□ -2.5
TFB5Q3E7C1 snR46snR46 197 nt-0.55□□□□□ -2.5
TFB5Q3E7C1 snR80snR80 171 nt-0.56□□□□□ -2.5
TFB5Q3E7C1 YOR329W-AYOR329W-A 210 nt-0.56□□□□□ -2.5
TFB5Q3E7C1 tQ(UUG)QtQ(UUG)Q 76 nt-0.57□□□□□ -2.5
TFB5Q3E7C1 Q0142Q0142 177 nt-0.58□□□□□ -2.5
TFB5Q3E7C1 YIL071W-AYIL071W-A 477 nt-0.6□□□□□ -2.51
TFB5Q3E7C1 snR48snR48 113 nt-0.62□□□□□ -2.51
TFB5Q3E7C1 YDL007C-AYDL007C-A 258 nt-0.63□□□□□ -2.51
TFB5Q3E7C1 PMP2YEL017C-A 132 nt-0.63□□□□□ -2.51
TFB5Q3E7C1 YLR342W-AYLR342W-A 174 nt-0.63□□□□□ -2.51
TFB5Q3E7C1 snR52snR52 92 nt-0.63□□□□□ -2.51
TFB5Q3E7C1 RDS3YPR094W 324 nt-0.67□□□□□ -2.52
TFB5Q3E7C1 YER090C-AYER090C-A 90 nt-0.68□□□□□ -2.52
TFB5Q3E7C1 tA(UGC)QtA(UGC)Q 76 nt-0.69□□□□□ -2.52
TFB5Q3E7C1 YNL067W-BYNL067W-B 141 nt-0.74□□□□□ -2.53
TFB5Q3E7C1 tL(UAA)QtL(UAA)Q 85 nt-0.75□□□□□ -2.53
TFB5Q3E7C1 PAU9YBL108C-A 129 nt-0.75□□□□□ -2.53
TFB5Q3E7C1 SEC10YLR166C 2616 nt-0.75□□□□□ -2.53
TFB5Q3E7C1 YJL113WYJL113W 4647 nt-0.77□□□□□ -2.53
TFB5Q3E7C1 YNL205CYNL205C 423 nt-0.77□□□□□ -2.53
TFB5Q3E7C1 YNL266WYNL266W 420 nt-0.77□□□□□ -2.53
TFB5Q3E7C1 snR50snR50 90 nt-0.77□□□□□ -2.53
TFB5Q3E7C1 tD(GUC)QtD(GUC)Q 75 nt-0.79□□□□□ -2.54
TFB5Q3E7C1 JLP2YMR132C 627 nt-0.8□□□□□ -2.54
TFB5Q3E7C1 URB1YKL014C 5295 nt-0.8□□□□□ -2.54
TFB5Q3E7C1 YHL009W-BYHL009W-B 5409 nt-0.82□□□□□ -2.54
TFB5Q3E7C1 YDR406W-AYDR406W-A 246 nt-0.83□□□□□ -2.54
TFB5Q3E7C1 YHL015W-AYHL015W-A 84 nt-0.83□□□□□ -2.54
TFB5Q3E7C1 YOR102WYOR102W 351 nt-0.83□□□□□ -2.54
TFB5Q3E7C1 YLR286W-AYLR286W-A 135 nt-0.87□□□□□ -2.55
TFB5Q3E7C1 YBR178WYBR178W 375 nt-0.9□□□□□ -2.55
TFB5Q3E7C1 YDL159C-BYDL159C-B 177 nt-0.94□□□□□ -2.56
TFB5Q3E7C1 snR67snR67 82 nt-0.95□□□□□ -2.56
TFB5Q3E7C1 YJL150WYJL150W 303 nt-0.98□□□□□ -2.57
TFB5Q3E7C1 YMR046W-AYMR046W-A 129 nt-0.99□□□□□ -2.57
TFB5Q3E7C1 YNL198CYNL198C 303 nt-0.99□□□□□ -2.57
TFB5Q3E7C1 snR33snR33 183 nt-1.06□□□□□ -2.58
TFB5Q3E7C1 YBR196C-AYBR196C-A 150 nt-1.08□□□□□ -2.58
TFB5Q3E7C1 SKI7YOR076C 2244 nt-1.09□□□□□ -2.58
TFB5Q3E7C1 YLR299C-AYLR299C-A 93 nt-1.1□□□□□ -2.59
TFB5Q3E7C1 SPG3YDR504C 384 nt-1.11□□□□□ -2.59
TFB5Q3E7C1 YBL053WYBL053W 375 nt-1.13□□□□□ -2.59
TFB5Q3E7C1 SOM1YEL059C-A 225 nt-1.19□□□□□ -2.6
TFB5Q3E7C1 tM(CAU)Q1tM(CAU)Q1 76 nt-1.19□□□□□ -2.6
TFB5Q3E7C1 snR161snR161 161 nt-1.19□□□□□ -2.6
TFB5Q3E7C1 YCR095W-AYCR095W-A 159 nt-1.24□□□□□ -2.61
TFB5Q3E7C1 tT(UGU)G1tT(UGU)G1 72 nt-1.33□□□□□ -2.62
TFB5Q3E7C1 tT(UGU)G2tT(UGU)G2 72 nt-1.33□□□□□ -2.62
TFB5Q3E7C1 tT(UGU)PtT(UGU)P 72 nt-1.33□□□□□ -2.62
TFB5Q3E7C1 YML054C-AYML054C-A 159 nt-1.34□□□□□ -2.62
TFB5Q3E7C1 YLR466C-BYLR466C-B 117 nt-1.4□□□□□ -2.63
TFB5Q3E7C1 YHR180C-BYHR180C-B 105 nt-1.41□□□□□ -2.64
TFB5Q3E7C1 YGR151CYGR151C 336 nt-1.47□□□□□ -2.64
TFB5Q3E7C1 tP(UGG)QtP(UGG)Q 72 nt-1.52□□□□□ -2.65
TFB5Q3E7C1 YNL338WYNL338W 159 nt-1.57□□□□□ -2.66
TFB5Q3E7C1 YCL001W-BYCL001W-B 255 nt-1.58□□□□□ -2.66
TFB5Q3E7C1 YOR376W-AYOR376W-A 156 nt-1.59□□□□□ -2.66
TFB5Q3E7C1 YGR240C-AYGR240C-A 201 nt-1.64□□□□□ -2.67
TFB5Q3E7C1 CDC65tQ(CUG)M 72 nt-1.66□□□□□ -2.68
TFB5Q3E7C1 snR77snR77 88 nt-1.68□□□□□ -2.68
TFB5Q3E7C1 YOL083C-AYOL083C-A 141 nt-1.68□□□□□ -2.68
TFB5Q3E7C1 YBL071C-BYBL071C-B 99 nt-1.69□□□□□ -2.68
TFB5Q3E7C1 YBR109W-AYBR109W-A 225 nt-1.7□□□□□ -2.68
TFB5Q3E7C1 YBR296C-AYBR296C-A 120 nt-1.7□□□□□ -2.68
TFB5Q3E7C1 YNL337WYNL337W 255 nt-1.72□□□□□ -2.68
TFB5Q3E7C1 YBR223W-AYBR223W-A 120 nt-1.72□□□□□ -2.68
TFB5Q3E7C1 RPL41AYDL184C 78 nt-1.73□□□□□ -2.69
TFB5Q3E7C1 YKL106C-AYKL106C-A 120 nt-1.73□□□□□ -2.69
TFB5Q3E7C1 YAL037C-AYAL037C-A 93 nt-1.76□□□□□ -2.69
TFB5Q3E7C1 YOL164W-AYOL164W-A 183 nt-1.76□□□□□ -2.69
TFB5Q3E7C1 YOR316C-AYOR316C-A 210 nt-1.76□□□□□ -2.69
TFB5Q3E7C1 Q0032Q0032 291 nt-1.79□□□□□ -2.7
TFB5Q3E7C1 snR38snR38 95 nt-1.84□□□□□ -2.7
TFB5Q3E7C1 YGL007C-AYGL007C-A 87 nt-1.89□□□□□ -2.71
TFB5Q3E7C1 snR81snR81 201 nt-1.9□□□□□ -2.71
TFB5Q3E7C1 YMR315W-AYMR315W-A 108 nt-1.9□□□□□ -2.71
TFB5Q3E7C1 YBL100W-CYBL100W-C 120 nt-1.92□□□□□ -2.72
TFB5Q3E7C1 snR47snR47 99 nt-1.93□□□□□ -2.72
TFB5Q3E7C1 tY(GUA)QtY(GUA)Q 84 nt-2□□□□□ -2.73
TFB5Q3E7C1 YNR077CYNR077C 255 nt-2.19□□□□□ -2.76
TFB5Q3E7C1 tS(GCU)Q1tS(GCU)Q1 86 nt-2.21□□□□□ -2.76
TFB5Q3E7C1 YKL225WYKL225W 348 nt-2.21□□□□□ -2.76
TFB5Q3E7C1 YGL041C-BYGL041C-B 183 nt-2.22□□□□□ -2.76
TFB5Q3E7C1 snR61snR61 90 nt-2.24□□□□□ -2.77
TFB5Q3E7C1 YNL103W-AYNL103W-A 90 nt-2.25□□□□□ -2.77
TFB5Q3E7C1 YLR294CYLR294C 330 nt-2.29□□□□□ -2.78
TFB5Q3E7C1 YOR225WYOR225W 330 nt-2.3□□□□□ -2.78
TFB5Q3E7C1 YOR309CYOR309C 381 nt-2.35□□□□□ -2.79
TFB5Q3E7C1 YDR034C-AYDR034C-A 177 nt-2.41□□□□□ -2.8
TFB5Q3E7C1 YNL170WYNL170W 396 nt-2.41□□□□□ -2.8
TFB5Q3E7C1 snR6snR6 112 nt-2.44□□□□□ -2.8
TFB5Q3E7C1 snR62snR62 100 nt-2.46□□□□□ -2.8
TFB5Q3E7C1 YDL114W-AYDL114W-A 114 nt-2.49□□□□□ -2.81
TFB5Q3E7C1 tV(UAC)QtV(UAC)Q 76 nt-2.49□□□□□ -2.81
Retrieved 100 of 7,029 protein–RNA pairs in 67.3 ms