Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-BQ31612 FBXW4P1-201ENST00000426721 2239 ntBASIC19.43■□□□□ 0.7
HLA-BQ31612 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-BQ31612 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-BQ31612 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-BQ31612 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
HLA-BQ31612 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 AC087388.1-201ENST00000571370 1112 ntBASIC19.42■□□□□ 0.7
HLA-BQ31612 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 AL445675.2-201ENST00000620291 557 ntBASIC19.42■□□□□ 0.7
HLA-BQ31612 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HLA-BQ31612 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 AL121603.2-201ENST00000557373 2117 ntBASIC19.42■□□□□ 0.7
HLA-BQ31612 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-BQ31612 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HLA-BQ31612 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
HLA-BQ31612 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-BQ31612 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 ATP5G1P1-201ENST00000448724 379 ntBASIC19.41■□□□□ 0.7
HLA-BQ31612 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 AC026271.3-201ENST00000571884 352 ntBASIC19.41■□□□□ 0.7
HLA-BQ31612 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HLA-BQ31612 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.41■□□□□ 0.7
HLA-BQ31612 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-BQ31612 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-BQ31612 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-BQ31612 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-BQ31612 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-BQ31612 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-BQ31612 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HLA-BQ31612 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-BQ31612 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-BQ31612 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
HLA-BQ31612 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-BQ31612 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-BQ31612 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-BQ31612 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-BQ31612 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-BQ31612 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-BQ31612 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-BQ31612 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HLA-BQ31612 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-BQ31612 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-BQ31612 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-BQ31612 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.4■□□□□ 0.7
HLA-BQ31612 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-BQ31612 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-BQ31612 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
HLA-BQ31612 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-BQ31612 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 ECEL1P2-202ENST00000465689 757 ntBASIC19.39■□□□□ 0.69
HLA-BQ31612 B3GAT3P1-201ENST00000471720 806 ntBASIC19.39■□□□□ 0.69
HLA-BQ31612 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 EGLN1P1-201ENST00000531623 762 ntBASIC19.39■□□□□ 0.69
HLA-BQ31612 WWOX-216ENST00000569818 525 ntBASIC19.39■□□□□ 0.69
HLA-BQ31612 AP005242.2-201ENST00000580065 1175 ntBASIC19.39■□□□□ 0.69
HLA-BQ31612 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.39■□□□□ 0.69
HLA-BQ31612 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
HLA-BQ31612 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-BQ31612 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-BQ31612 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-BQ31612 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-BQ31612 TSPY14P-201ENST00000303979 915 ntBASIC19.38■□□□□ 0.69
HLA-BQ31612 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-BQ31612 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-BQ31612 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms