Protein–RNA interactions for Protein: Q06673

ECM30, Protein ECM30, yeastyeast

Predictions only

Length 1,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM30Q06673 YDR371C-AYDR371C-A 105 nt0.56□□□□□ -2.32
ECM30Q06673 tL(UAA)QtL(UAA)Q 85 nt0.56□□□□□ -2.32
ECM30Q06673 YOR329W-AYOR329W-A 210 nt0.55□□□□□ -2.32
ECM30Q06673 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
ECM30Q06673 YDL007C-AYDL007C-A 258 nt0.53□□□□□ -2.32
ECM30Q06673 SBH1YER087C-B 249 nt0.52□□□□□ -2.33
ECM30Q06673 tM(CAU)Q2tM(CAU)Q2 78 nt0.52□□□□□ -2.33
ECM30Q06673 YBL053WYBL053W 375 nt0.51□□□□□ -2.33
ECM30Q06673 snR39BsnR39B 96 nt0.51□□□□□ -2.33
ECM30Q06673 MLP2YIL149C 5040 nt0.49□□□□□ -2.33
ECM30Q06673 YDR210WYDR210W 228 nt0.49□□□□□ -2.33
ECM30Q06673 YLR294CYLR294C 330 nt0.49□□□□□ -2.33
ECM30Q06673 ORC3YLL004W 1851 nt0.49□□□□□ -2.33
ECM30Q06673 RCO1YMR075W 2055 nt0.47□□□□□ -2.33
ECM30Q06673 YBL100W-BYBL100W-B 5313 nt0.47□□□□□ -2.33
ECM30Q06673 YGR146C-AYGR146C-A 162 nt0.46□□□□□ -2.34
ECM30Q06673 ESP1YGR098C 4893 nt0.45□□□□□ -2.34
ECM30Q06673 YNL067W-BYNL067W-B 141 nt0.43□□□□□ -2.34
ECM30Q06673 CSE1YGL238W 2883 nt0.42□□□□□ -2.34
ECM30Q06673 YBR099CYBR099C 384 nt0.37□□□□□ -2.35
ECM30Q06673 YOR186C-AYOR186C-A 210 nt0.36□□□□□ -2.35
ECM30Q06673 YNL054W-BYNL054W-B 5250 nt0.35□□□□□ -2.35
ECM30Q06673 YNL205CYNL205C 423 nt0.32□□□□□ -2.36
ECM30Q06673 YGR164WYGR164W 336 nt0.31□□□□□ -2.36
ECM30Q06673 MYO1YHR023W 5787 nt0.31□□□□□ -2.36
ECM30Q06673 PMP2YEL017C-A 132 nt0.28□□□□□ -2.36
ECM30Q06673 YJL077W-AYJL077W-A 87 nt0.28□□□□□ -2.36
ECM30Q06673 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
ECM30Q06673 YJL113WYJL113W 4647 nt0.27□□□□□ -2.37
ECM30Q06673 YCR095W-AYCR095W-A 159 nt0.27□□□□□ -2.37
ECM30Q06673 EST1YLR233C 2100 nt0.25□□□□□ -2.37
ECM30Q06673 snR69snR69 101 nt0.25□□□□□ -2.37
ECM30Q06673 SOM1YEL059C-A 225 nt0.25□□□□□ -2.37
ECM30Q06673 snR45snR45 172 nt0.25□□□□□ -2.37
ECM30Q06673 SOV1YMR066W 2697 nt0.25□□□□□ -2.37
ECM30Q06673 YIL071W-AYIL071W-A 477 nt0.21□□□□□ -2.38
ECM30Q06673 SEC10YLR166C 2616 nt0.2□□□□□ -2.38
ECM30Q06673 YCL001W-BYCL001W-B 255 nt0.2□□□□□ -2.38
ECM30Q06673 YNL266WYNL266W 420 nt0.17□□□□□ -2.38
ECM30Q06673 RDS3YPR094W 324 nt0.17□□□□□ -2.38
ECM30Q06673 tD(GUC)QtD(GUC)Q 75 nt0.15□□□□□ -2.39
ECM30Q06673 YNL170WYNL170W 396 nt0.14□□□□□ -2.39
ECM30Q06673 ATP8Q0080 147 nt0.13□□□□□ -2.39
ECM30Q06673 tQ(UUG)QtQ(UUG)Q 76 nt0.11□□□□□ -2.39
ECM30Q06673 YBR178WYBR178W 375 nt0.08□□□□□ -2.4
ECM30Q06673 YBR196C-AYBR196C-A 150 nt0.08□□□□□ -2.4
ECM30Q06673 YER090C-AYER090C-A 90 nt0.05□□□□□ -2.4
ECM30Q06673 YLR286W-AYLR286W-A 135 nt0.04□□□□□ -2.4
ECM30Q06673 snR128snR128 126 nt0.04□□□□□ -2.4
ECM30Q06673 TFB5YDR079C-A 219 nt0.03□□□□□ -2.4
ECM30Q06673 Q0092Q0092 141 nt0.03□□□□□ -2.4
ECM30Q06673 YDL159C-BYDL159C-B 177 nt0.02□□□□□ -2.41
ECM30Q06673 YML100W-AYML100W-A 174 nt-0.03□□□□□ -2.41
ECM30Q06673 snR50snR50 90 nt-0.03□□□□□ -2.41
ECM30Q06673 YLR299C-AYLR299C-A 93 nt-0.05□□□□□ -2.42
ECM30Q06673 snR67snR67 82 nt-0.16□□□□□ -2.44
ECM30Q06673 YAL037C-AYAL037C-A 93 nt-0.18□□□□□ -2.44
ECM30Q06673 YOL083C-AYOL083C-A 141 nt-0.22□□□□□ -2.44
ECM30Q06673 snR61snR61 90 nt-0.23□□□□□ -2.45
ECM30Q06673 snR81snR81 201 nt-0.23□□□□□ -2.45
ECM30Q06673 SBH2YER019C-A 267 nt-0.23□□□□□ -2.45
ECM30Q06673 YNL103W-AYNL103W-A 90 nt-0.23□□□□□ -2.45
ECM30Q06673 YBL071C-BYBL071C-B 99 nt-0.23□□□□□ -2.45
ECM30Q06673 YML054C-AYML054C-A 159 nt-0.25□□□□□ -2.45
ECM30Q06673 Q0143Q0143 153 nt-0.29□□□□□ -2.46
ECM30Q06673 YHR180C-BYHR180C-B 105 nt-0.29□□□□□ -2.46
ECM30Q06673 tA(UGC)QtA(UGC)Q 76 nt-0.3□□□□□ -2.46
ECM30Q06673 YGL041C-BYGL041C-B 183 nt-0.31□□□□□ -2.46
ECM30Q06673 PAU9YBL108C-A 129 nt-0.32□□□□□ -2.46
ECM30Q06673 YOL164W-AYOL164W-A 183 nt-0.32□□□□□ -2.46
ECM30Q06673 SKI7YOR076C 2244 nt-0.33□□□□□ -2.46
ECM30Q06673 YNR077CYNR077C 255 nt-0.36□□□□□ -2.47
ECM30Q06673 URB1YKL014C 5295 nt-0.37□□□□□ -2.47
ECM30Q06673 YBL100W-CYBL100W-C 120 nt-0.4□□□□□ -2.47
ECM30Q06673 YGR240C-AYGR240C-A 201 nt-0.44□□□□□ -2.48
ECM30Q06673 YBR109W-AYBR109W-A 225 nt-0.44□□□□□ -2.48
ECM30Q06673 YBR296C-AYBR296C-A 120 nt-0.46□□□□□ -2.48
ECM30Q06673 YHL009W-BYHL009W-B 5409 nt-0.47□□□□□ -2.48
ECM30Q06673 RPL41AYDL184C 78 nt-0.47□□□□□ -2.48
ECM30Q06673 snR85snR85 171 nt-0.48□□□□□ -2.49
ECM30Q06673 snR47snR47 99 nt-0.48□□□□□ -2.49
ECM30Q06673 YMR326CYMR326C 309 nt-0.55□□□□□ -2.5
ECM30Q06673 snR38snR38 95 nt-0.55□□□□□ -2.5
ECM30Q06673 tS(GCU)Q1tS(GCU)Q1 86 nt-0.56□□□□□ -2.5
ECM30Q06673 snR62snR62 100 nt-0.58□□□□□ -2.5
ECM30Q06673 YHR217CYHR217C 462 nt-0.6□□□□□ -2.51
ECM30Q06673 tT(UGU)G1tT(UGU)G1 72 nt-0.63□□□□□ -2.51
ECM30Q06673 tT(UGU)G2tT(UGU)G2 72 nt-0.63□□□□□ -2.51
ECM30Q06673 tT(UGU)PtT(UGU)P 72 nt-0.63□□□□□ -2.51
ECM30Q06673 YDR034C-AYDR034C-A 177 nt-0.66□□□□□ -2.52
ECM30Q06673 snR161snR161 161 nt-0.66□□□□□ -2.52
ECM30Q06673 snR33snR33 183 nt-0.67□□□□□ -2.52
ECM30Q06673 YOR376W-AYOR376W-A 156 nt-0.68□□□□□ -2.52
ECM30Q06673 YKL106C-AYKL106C-A 120 nt-0.69□□□□□ -2.52
ECM30Q06673 YBL109WYBL109W 336 nt-0.7□□□□□ -2.52
ECM30Q06673 YKL225WYKL225W 348 nt-0.71□□□□□ -2.52
ECM30Q06673 YOR316C-AYOR316C-A 210 nt-0.79□□□□□ -2.54
ECM30Q06673 YDR524C-AYDR524C-A 120 nt-0.83□□□□□ -2.54
ECM30Q06673 YBR223W-AYBR223W-A 120 nt-0.89□□□□□ -2.55
ECM30Q06673 YLL066W-BYLL066W-B 171 nt-0.91□□□□□ -2.56
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms