Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
IRX4P78413 MIR1224-201ENST00000408193 85 ntBASIC20.66■□□□□ 0.9
IRX4P78413 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 Z99916.2-201ENST00000604037 246 ntBASIC20.66■□□□□ 0.9
IRX4P78413 HLA-B-256ENST00000639848 1089 ntBASIC20.66■□□□□ 0.9
IRX4P78413 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
IRX4P78413 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
IRX4P78413 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
IRX4P78413 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.66■□□□□ 0.9
IRX4P78413 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.65■□□□□ 0.9
IRX4P78413 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
IRX4P78413 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.65■□□□□ 0.9
IRX4P78413 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.65■□□□□ 0.9
IRX4P78413 REXO1L12P-201ENST00000622156 912 ntBASIC20.65■□□□□ 0.9
IRX4P78413 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.65■□□□□ 0.9
IRX4P78413 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX4P78413 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
IRX4P78413 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IRX4P78413 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.64■□□□□ 0.9
IRX4P78413 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IRX4P78413 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.64■□□□□ 0.89
IRX4P78413 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.64■□□□□ 0.89
IRX4P78413 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.64■□□□□ 0.89
IRX4P78413 AC211429.1-201ENST00000415277 523 ntBASIC20.64■□□□□ 0.89
IRX4P78413 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
IRX4P78413 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 CYP2T3P-201ENST00000601990 817 ntBASIC20.64■□□□□ 0.89
IRX4P78413 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.64■□□□□ 0.89
IRX4P78413 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
IRX4P78413 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX4P78413 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
IRX4P78413 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 AC007952.6-201ENST00000573168 2673 ntBASIC20.63■□□□□ 0.89
IRX4P78413 AC003957.1-201ENST00000625108 2673 ntBASIC20.63■□□□□ 0.89
IRX4P78413 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
IRX4P78413 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.63■□□□□ 0.89
IRX4P78413 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
IRX4P78413 AC112907.3-201ENST00000577781 2400 ntBASIC20.63■□□□□ 0.89
IRX4P78413 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IRX4P78413 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 KRT17P3-201ENST00000420566 1262 ntBASIC20.63■□□□□ 0.89
IRX4P78413 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.63■□□□□ 0.89
IRX4P78413 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.63■□□□□ 0.89
IRX4P78413 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.63■□□□□ 0.89
IRX4P78413 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IRX4P78413 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX4P78413 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
IRX4P78413 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 FAM210CP-201ENST00000445714 574 ntBASIC20.62■□□□□ 0.89
IRX4P78413 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 RN7SL471P-201ENST00000580476 299 ntBASIC20.62■□□□□ 0.89
IRX4P78413 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.62■□□□□ 0.89
IRX4P78413 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 AC007225.1-201ENST00000566331 1836 ntBASIC20.62■□□□□ 0.89
IRX4P78413 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
IRX4P78413 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX4P78413 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
IRX4P78413 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms