Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRPFP62306 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.72■■□□□ 1.07
SNRPFP62306 UNC93B5-201ENST00000530315 699 ntBASIC21.72■■□□□ 1.07
SNRPFP62306 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 AC006557.6-201ENST00000623071 864 ntBASIC21.72■■□□□ 1.07
SNRPFP62306 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRPFP62306 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNRPFP62306 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRPFP62306 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRPFP62306 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SNRPFP62306 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.72■■□□□ 1.07
SNRPFP62306 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 AC116351.2-201ENST00000606540 1585 ntBASIC21.71■■□□□ 1.07
SNRPFP62306 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SNRPFP62306 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.71■■□□□ 1.07
SNRPFP62306 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.71■■□□□ 1.07
SNRPFP62306 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.71■■□□□ 1.07
SNRPFP62306 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.71■■□□□ 1.07
SNRPFP62306 AC120498.8-201ENST00000614275 531 ntBASIC21.71■■□□□ 1.07
SNRPFP62306 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNRPFP62306 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.71■■□□□ 1.07
SNRPFP62306 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.71■■□□□ 1.07
SNRPFP62306 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SNRPFP62306 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.7■■□□□ 1.06
SNRPFP62306 UNC93B4-201ENST00000505679 747 ntBASIC21.7■■□□□ 1.06
SNRPFP62306 KRT18P6-201ENST00000555540 1265 ntBASIC21.7■■□□□ 1.06
SNRPFP62306 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SNRPFP62306 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.7■■□□□ 1.06
SNRPFP62306 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNRPFP62306 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPFP62306 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.69■■□□□ 1.06
SNRPFP62306 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SNRPFP62306 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPFP62306 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPFP62306 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPFP62306 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPFP62306 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.69■■□□□ 1.06
SNRPFP62306 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SNRPFP62306 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.69■■□□□ 1.06
SNRPFP62306 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPFP62306 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SNRPFP62306 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.69■■□□□ 1.06
SNRPFP62306 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNRPFP62306 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.69■■□□□ 1.06
SNRPFP62306 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.68■■□□□ 1.06
SNRPFP62306 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.68■■□□□ 1.06
SNRPFP62306 RPS2P52-201ENST00000469610 820 ntBASIC21.68■■□□□ 1.06
SNRPFP62306 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SNRPFP62306 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 SOX15-203ENST00000570788 1093 ntBASIC21.68■■□□□ 1.06
SNRPFP62306 AC008687.6-201ENST00000596318 630 ntBASIC21.68■■□□□ 1.06
SNRPFP62306 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.68■■□□□ 1.06
SNRPFP62306 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.68■■□□□ 1.06
SNRPFP62306 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 AC112907.3-201ENST00000577781 2400 ntBASIC21.68■■□□□ 1.06
SNRPFP62306 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNRPFP62306 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SNRPFP62306 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.67■■□□□ 1.06
SNRPFP62306 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.67■■□□□ 1.06
SNRPFP62306 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPFP62306 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPFP62306 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPFP62306 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.67■■□□□ 1.06
SNRPFP62306 AC018553.1-201ENST00000616682 1458 ntBASIC21.67■■□□□ 1.06
SNRPFP62306 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.67■■□□□ 1.06
SNRPFP62306 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SNRPFP62306 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.67■■□□□ 1.06
SNRPFP62306 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SNRPFP62306 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPFP62306 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.67■■□□□ 1.06
SNRPFP62306 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNRPFP62306 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPFP62306 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNRPFP62306 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNRPFP62306 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms