Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS3AP61247 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 AC004408.2-201ENST00000623613 2777 ntBASIC18.62■□□□□ 0.57
RPS3AP61247 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RPS3AP61247 AC091799.1-201ENST00000422823 811 ntBASIC18.62■□□□□ 0.57
RPS3AP61247 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.62■□□□□ 0.57
RPS3AP61247 AC105036.2-201ENST00000569468 176 ntBASIC18.62■□□□□ 0.57
RPS3AP61247 AL050303.2-201ENST00000619798 666 ntBASIC18.62■□□□□ 0.57
RPS3AP61247 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS3AP61247 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS3AP61247 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS3AP61247 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RPS3AP61247 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS3AP61247 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.62■□□□□ 0.57
RPS3AP61247 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS3AP61247 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.62■□□□□ 0.57
RPS3AP61247 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPS3AP61247 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RPS3AP61247 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.61■□□□□ 0.57
RPS3AP61247 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RPS3AP61247 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS3AP61247 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS3AP61247 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.61■□□□□ 0.57
RPS3AP61247 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.61■□□□□ 0.57
RPS3AP61247 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.61■□□□□ 0.57
RPS3AP61247 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPS3AP61247 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.61■□□□□ 0.57
RPS3AP61247 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RPS3AP61247 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.61■□□□□ 0.57
RPS3AP61247 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPS3AP61247 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.6■□□□□ 0.57
RPS3AP61247 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RPS3AP61247 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RPS3AP61247 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
RPS3AP61247 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.6■□□□□ 0.57
RPS3AP61247 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.6■□□□□ 0.57
RPS3AP61247 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPS3AP61247 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RPS3AP61247 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 AL512408.1-201ENST00000569378 2000 ntBASIC18.59■□□□□ 0.57
RPS3AP61247 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RPS3AP61247 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.59■□□□□ 0.57
RPS3AP61247 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.59■□□□□ 0.57
RPS3AP61247 AC007322.3-201ENST00000426526 701 ntBASIC18.59■□□□□ 0.57
RPS3AP61247 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.59■□□□□ 0.57
RPS3AP61247 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 AC104771.1-201ENST00000603335 964 ntBASIC18.59■□□□□ 0.57
RPS3AP61247 FAM21FP-204ENST00000608637 956 ntBASIC18.59■□□□□ 0.57
RPS3AP61247 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
RPS3AP61247 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RPS3AP61247 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPS3AP61247 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPS3AP61247 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RPS3AP61247 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPS3AP61247 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RPS3AP61247 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPS3AP61247 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPS3AP61247 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPS3AP61247 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RPS3AP61247 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPS3AP61247 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RPS3AP61247 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPS3AP61247 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPS3AP61247 AL512625.2-201ENST00000417533 625 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms