Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.86□□□□□ -0.03
CMC4P56277 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.86□□□□□ -0.03
CMC4P56277 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.86□□□□□ -0.03
CMC4P56277 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CMC4P56277 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.86□□□□□ -0.03
CMC4P56277 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.86□□□□□ -0.03
CMC4P56277 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CMC4P56277 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CMC4P56277 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMC4P56277 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.85□□□□□ -0.03
CMC4P56277 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CMC4P56277 FEM1AP1-201ENST00000431297 1995 ntBASIC14.85□□□□□ -0.03
CMC4P56277 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.85□□□□□ -0.03
CMC4P56277 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.85□□□□□ -0.03
CMC4P56277 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CMC4P56277 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.85□□□□□ -0.03
CMC4P56277 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.85□□□□□ -0.03
CMC4P56277 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.85□□□□□ -0.03
CMC4P56277 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.85□□□□□ -0.03
CMC4P56277 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CMC4P56277 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CMC4P56277 AL121829.2-201ENST00000620908 328 ntBASIC14.85□□□□□ -0.03
CMC4P56277 AL121906.2-201ENST00000621597 723 ntBASIC14.85□□□□□ -0.03
CMC4P56277 AC006557.6-201ENST00000623071 864 ntBASIC14.85□□□□□ -0.03
CMC4P56277 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.85□□□□□ -0.03
CMC4P56277 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CMC4P56277 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.85□□□□□ -0.03
CMC4P56277 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.85□□□□□ -0.03
CMC4P56277 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMC4P56277 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.84□□□□□ -0.03
CMC4P56277 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.84□□□□□ -0.03
CMC4P56277 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CMC4P56277 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CMC4P56277 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 AP005212.1-201ENST00000581547 1997 ntBASIC14.84□□□□□ -0.03
CMC4P56277 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CMC4P56277 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 ESRRAP1-201ENST00000400596 1257 ntBASIC14.84□□□□□ -0.03
CMC4P56277 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.84□□□□□ -0.03
CMC4P56277 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.84□□□□□ -0.03
CMC4P56277 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.84□□□□□ -0.03
CMC4P56277 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.84□□□□□ -0.03
CMC4P56277 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CMC4P56277 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.84□□□□□ -0.03
CMC4P56277 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.84□□□□□ -0.03
CMC4P56277 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CMC4P56277 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CMC4P56277 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CMC4P56277 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.84□□□□□ -0.03
CMC4P56277 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CMC4P56277 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CMC4P56277 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMC4P56277 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMC4P56277 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CMC4P56277 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CMC4P56277 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms