Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.89■□□□□ 0.93
EPHB3P54753 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.89■□□□□ 0.93
EPHB3P54753 AP003071.4-201ENST00000562276 1284 ntBASIC20.89■□□□□ 0.93
EPHB3P54753 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.89■□□□□ 0.93
EPHB3P54753 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.89■□□□□ 0.93
EPHB3P54753 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EPHB3P54753 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.89■□□□□ 0.93
EPHB3P54753 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
EPHB3P54753 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
EPHB3P54753 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
EPHB3P54753 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
EPHB3P54753 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.89■□□□□ 0.93
EPHB3P54753 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
EPHB3P54753 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
EPHB3P54753 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.88■□□□□ 0.93
EPHB3P54753 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
EPHB3P54753 KRT16P6-202ENST00000425692 1426 ntBASIC20.88■□□□□ 0.93
EPHB3P54753 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.88■□□□□ 0.93
EPHB3P54753 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.88■□□□□ 0.93
EPHB3P54753 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.88■□□□□ 0.93
EPHB3P54753 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
EPHB3P54753 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.88■□□□□ 0.93
EPHB3P54753 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.88■□□□□ 0.93
EPHB3P54753 TSPY15P-201ENST00000457163 923 ntBASIC20.88■□□□□ 0.93
EPHB3P54753 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.88■□□□□ 0.93
EPHB3P54753 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.88■□□□□ 0.93
EPHB3P54753 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EPHB3P54753 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
EPHB3P54753 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
EPHB3P54753 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.87■□□□□ 0.93
EPHB3P54753 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
EPHB3P54753 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
EPHB3P54753 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.87■□□□□ 0.93
EPHB3P54753 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.87■□□□□ 0.93
EPHB3P54753 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.87■□□□□ 0.93
EPHB3P54753 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EPHB3P54753 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.87■□□□□ 0.93
EPHB3P54753 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHB3P54753 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.87■□□□□ 0.93
EPHB3P54753 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHB3P54753 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHB3P54753 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHB3P54753 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
EPHB3P54753 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.86■□□□□ 0.93
EPHB3P54753 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
EPHB3P54753 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.86■□□□□ 0.93
EPHB3P54753 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.86■□□□□ 0.93
EPHB3P54753 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.86■□□□□ 0.93
EPHB3P54753 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.86■□□□□ 0.93
EPHB3P54753 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHB3P54753 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.86■□□□□ 0.93
EPHB3P54753 AL353708.3-201ENST00000610272 989 ntBASIC20.86■□□□□ 0.93
EPHB3P54753 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.86■□□□□ 0.93
EPHB3P54753 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
EPHB3P54753 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHB3P54753 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHB3P54753 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
EPHB3P54753 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
EPHB3P54753 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.85■□□□□ 0.93
EPHB3P54753 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.85■□□□□ 0.93
EPHB3P54753 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
EPHB3P54753 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.85■□□□□ 0.93
EPHB3P54753 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
EPHB3P54753 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.85■□□□□ 0.93
EPHB3P54753 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
EPHB3P54753 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.85■□□□□ 0.93
EPHB3P54753 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.85■□□□□ 0.93
EPHB3P54753 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.85■□□□□ 0.93
EPHB3P54753 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EPHB3P54753 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
EPHB3P54753 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.85■□□□□ 0.93
EPHB3P54753 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms