Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC25A1P53007 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC25A1P53007 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
SLC25A1P53007 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SLC25A1P53007 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 AC093484.2-201ENST00000580996 2166 ntBASIC17.7■□□□□ 0.42
SLC25A1P53007 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SLC25A1P53007 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC25A1P53007 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC25A1P53007 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC25A1P53007 AC006015.1-201ENST00000429970 570 ntBASIC17.7■□□□□ 0.42
SLC25A1P53007 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.7■□□□□ 0.42
SLC25A1P53007 CYP2T1P-201ENST00000432607 1285 ntBASIC17.7■□□□□ 0.42
SLC25A1P53007 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC25A1P53007 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.7■□□□□ 0.42
SLC25A1P53007 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.7■□□□□ 0.42
SLC25A1P53007 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SLC25A1P53007 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC25A1P53007 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.7■□□□□ 0.42
SLC25A1P53007 RNF165-205ENST00000588679 2904 ntBASIC17.7■□□□□ 0.42
SLC25A1P53007 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SLC25A1P53007 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 AC011767.1-201ENST00000617410 1153 ntBASIC17.69■□□□□ 0.42
SLC25A1P53007 AC008694.1-202ENST00000636953 945 ntBASIC17.69■□□□□ 0.42
SLC25A1P53007 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SLC25A1P53007 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
SLC25A1P53007 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC25A1P53007 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.69■□□□□ 0.42
SLC25A1P53007 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SLC25A1P53007 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SLC25A1P53007 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC25A1P53007 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC25A1P53007 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC25A1P53007 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC25A1P53007 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 AC023632.3-201ENST00000521633 145 ntBASIC17.68■□□□□ 0.42
SLC25A1P53007 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC25A1P53007 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC25A1P53007 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SLC25A1P53007 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC25A1P53007 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SLC25A1P53007 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC25A1P53007 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC25A1P53007 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC25A1P53007 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC25A1P53007 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC25A1P53007 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC25A1P53007 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms