Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
GABRA4P48169 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GABRA4P48169 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 BX119927.1-201ENST00000636596 1552 ntBASIC18.93■□□□□ 0.62
GABRA4P48169 FEM1AP1-201ENST00000431297 1995 ntBASIC18.93■□□□□ 0.62
GABRA4P48169 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GABRA4P48169 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
GABRA4P48169 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
GABRA4P48169 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GABRA4P48169 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.93■□□□□ 0.62
GABRA4P48169 NBPF21P-201ENST00000425093 1451 ntBASIC18.93■□□□□ 0.62
GABRA4P48169 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.93■□□□□ 0.62
GABRA4P48169 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.93■□□□□ 0.62
GABRA4P48169 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.93■□□□□ 0.62
GABRA4P48169 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.93■□□□□ 0.62
GABRA4P48169 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GABRA4P48169 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.93■□□□□ 0.62
GABRA4P48169 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GABRA4P48169 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GABRA4P48169 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.93■□□□□ 0.62
GABRA4P48169 AC116351.2-201ENST00000606540 1585 ntBASIC18.93■□□□□ 0.62
GABRA4P48169 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GABRA4P48169 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GABRA4P48169 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GABRA4P48169 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
GABRA4P48169 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
GABRA4P48169 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
GABRA4P48169 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.92■□□□□ 0.62
GABRA4P48169 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GABRA4P48169 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.92■□□□□ 0.62
GABRA4P48169 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.92■□□□□ 0.62
GABRA4P48169 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GABRA4P48169 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GABRA4P48169 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRA4P48169 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GABRA4P48169 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 AL162377.1-201ENST00000618844 1793 ntBASIC18.91■□□□□ 0.62
GABRA4P48169 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.91■□□□□ 0.62
GABRA4P48169 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GABRA4P48169 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
GABRA4P48169 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 AC012618.2-201ENST00000428058 849 ntBASIC18.91■□□□□ 0.62
GABRA4P48169 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.91■□□□□ 0.62
GABRA4P48169 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.91■□□□□ 0.62
GABRA4P48169 RARRES2P10-201ENST00000564312 460 ntBASIC18.91■□□□□ 0.62
GABRA4P48169 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
GABRA4P48169 AC233702.5-201ENST00000584107 538 ntBASIC18.91■□□□□ 0.62
GABRA4P48169 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GABRA4P48169 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.91■□□□□ 0.62
GABRA4P48169 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.91■□□□□ 0.62
GABRA4P48169 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRA4P48169 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.91■□□□□ 0.62
GABRA4P48169 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GABRA4P48169 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 TFP1-202ENST00000475455 1573 ntBASIC18.9■□□□□ 0.62
GABRA4P48169 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GABRA4P48169 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRA4P48169 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms