Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 HLA-G-203ENST00000376818 1127 ntBASIC20.91■□□□□ 0.94
MTHFRP42898 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.91■□□□□ 0.94
MTHFRP42898 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MTHFRP42898 DUX4L26-201ENST00000489078 1255 ntBASIC20.91■□□□□ 0.94
MTHFRP42898 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
MTHFRP42898 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MTHFRP42898 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.91■□□□□ 0.94
MTHFRP42898 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.91■□□□□ 0.94
MTHFRP42898 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
MTHFRP42898 NTF6B-201ENST00000591913 560 ntBASIC20.91■□□□□ 0.94
MTHFRP42898 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MTHFRP42898 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MTHFRP42898 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.9■□□□□ 0.94
MTHFRP42898 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
MTHFRP42898 AC027702.1-201ENST00000563810 1770 ntBASIC20.9■□□□□ 0.94
MTHFRP42898 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.9■□□□□ 0.94
MTHFRP42898 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MTHFRP42898 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.9■□□□□ 0.94
MTHFRP42898 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
MTHFRP42898 MIR2861-201ENST00000636310 90 ntBASIC20.9■□□□□ 0.94
MTHFRP42898 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.9■□□□□ 0.94
MTHFRP42898 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MTHFRP42898 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
MTHFRP42898 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
MTHFRP42898 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.9■□□□□ 0.94
MTHFRP42898 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MTHFRP42898 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.89■□□□□ 0.94
MTHFRP42898 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MTHFRP42898 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.89■□□□□ 0.94
MTHFRP42898 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MTHFRP42898 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MTHFRP42898 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MTHFRP42898 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MTHFRP42898 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MTHFRP42898 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.89■□□□□ 0.93
MTHFRP42898 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
MTHFRP42898 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MTHFRP42898 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MTHFRP42898 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.89■□□□□ 0.93
MTHFRP42898 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.89■□□□□ 0.93
MTHFRP42898 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.89■□□□□ 0.93
MTHFRP42898 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.89■□□□□ 0.93
MTHFRP42898 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.88■□□□□ 0.93
MTHFRP42898 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.88■□□□□ 0.93
MTHFRP42898 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.88■□□□□ 0.93
MTHFRP42898 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
MTHFRP42898 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.88■□□□□ 0.93
MTHFRP42898 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.88■□□□□ 0.93
MTHFRP42898 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.88■□□□□ 0.93
MTHFRP42898 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.88■□□□□ 0.93
MTHFRP42898 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
MTHFRP42898 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
MTHFRP42898 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MTHFRP42898 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
MTHFRP42898 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
MTHFRP42898 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
MTHFRP42898 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.87■□□□□ 0.93
MTHFRP42898 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.87■□□□□ 0.93
MTHFRP42898 LIN28AP1-201ENST00000429574 405 ntBASIC20.87■□□□□ 0.93
MTHFRP42898 AC104076.2-201ENST00000448912 469 ntBASIC20.87■□□□□ 0.93
MTHFRP42898 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.87■□□□□ 0.93
MTHFRP42898 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.87■□□□□ 0.93
MTHFRP42898 AC087388.1-201ENST00000571370 1112 ntBASIC20.87■□□□□ 0.93
MTHFRP42898 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.87■□□□□ 0.93
MTHFRP42898 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MTHFRP42898 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.87■□□□□ 0.93
MTHFRP42898 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms