Protein–RNA interactions for Protein: P40020

FIR1, Factor interacting with REF2, yeastyeast

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FIR1P40020 tD(GUC)QtD(GUC)Q 75 nt1.48□□□□□ -2.17
FIR1P40020 IRA1YBR140C 9279 nt1.47□□□□□ -2.17
FIR1P40020 tV(UAC)BtV(UAC)B 74 nt1.47□□□□□ -2.17
FIR1P40020 tV(UAC)DtV(UAC)D 74 nt1.47□□□□□ -2.17
FIR1P40020 EST1YLR233C 2100 nt1.45□□□□□ -2.18
FIR1P40020 UTP20YBL004W 7482 nt1.44□□□□□ -2.18
FIR1P40020 ORC3YLL004W 1851 nt1.44□□□□□ -2.18
FIR1P40020 snR69snR69 101 nt1.44□□□□□ -2.18
FIR1P40020 CSE1YGL238W 2883 nt1.43□□□□□ -2.18
FIR1P40020 DOP1YDR141C 5097 nt1.42□□□□□ -2.18
FIR1P40020 tQ(UUG)E2tQ(UUG)E2 72 nt1.41□□□□□ -2.18
FIR1P40020 snR47snR47 99 nt1.41□□□□□ -2.18
FIR1P40020 PET127YOR017W 2403 nt1.38□□□□□ -2.19
FIR1P40020 YLL006W-AYLL006W-A 177 nt1.38□□□□□ -2.19
FIR1P40020 YLR299C-AYLR299C-A 93 nt1.37□□□□□ -2.19
FIR1P40020 SPT7YBR081C 3999 nt1.37□□□□□ -2.19
FIR1P40020 BUL2YML111W 2763 nt1.37□□□□□ -2.19
FIR1P40020 SIP4YJL089W 2490 nt1.37□□□□□ -2.19
FIR1P40020 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
FIR1P40020 YOL014WYOL014W 375 nt1.34□□□□□ -2.19
FIR1P40020 RDS3YPR094W 324 nt1.34□□□□□ -2.19
FIR1P40020 YDL159C-BYDL159C-B 177 nt1.33□□□□□ -2.2
FIR1P40020 YPR117WYPR117W 7470 nt1.32□□□□□ -2.2
FIR1P40020 NIP1YMR309C 2439 nt1.32□□□□□ -2.2
FIR1P40020 snR53snR53 91 nt1.31□□□□□ -2.2
FIR1P40020 YJL077W-AYJL077W-A 87 nt1.28□□□□□ -2.2
FIR1P40020 RKR1YMR247C 4689 nt1.26□□□□□ -2.21
FIR1P40020 snR64snR64 101 nt1.25□□□□□ -2.21
FIR1P40020 YNL054W-BYNL054W-B 5250 nt1.2□□□□□ -2.22
FIR1P40020 YML054C-AYML054C-A 159 nt1.2□□□□□ -2.22
FIR1P40020 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
FIR1P40020 YBR109W-AYBR109W-A 225 nt1.19□□□□□ -2.22
FIR1P40020 YKL225WYKL225W 348 nt1.17□□□□□ -2.22
FIR1P40020 BUD3YCL014W 4911 nt1.15□□□□□ -2.23
FIR1P40020 YOR192C-BYOR192C-B 5313 nt1.14□□□□□ -2.23
FIR1P40020 YHR180C-BYHR180C-B 105 nt1.14□□□□□ -2.23
FIR1P40020 LTE1YAL024C 4308 nt1.12□□□□□ -2.23
FIR1P40020 YMR160WYMR160W 2451 nt1.11□□□□□ -2.23
FIR1P40020 snR38snR38 95 nt1.11□□□□□ -2.23
FIR1P40020 YDR371C-AYDR371C-A 105 nt1.1□□□□□ -2.23
FIR1P40020 tQ(UUG)QtQ(UUG)Q 76 nt1.1□□□□□ -2.23
FIR1P40020 RPL41AYDL184C 78 nt1.09□□□□□ -2.23
FIR1P40020 YKL145W-AYKL145W-A 93 nt1.09□□□□□ -2.23
FIR1P40020 YBR296C-AYBR296C-A 120 nt1.08□□□□□ -2.24
FIR1P40020 YER090C-AYER090C-A 90 nt1.07□□□□□ -2.24
FIR1P40020 VAM6YDL077C 3150 nt1.05□□□□□ -2.24
FIR1P40020 AI1Q0050 2505 nt1.04□□□□□ -2.24
FIR1P40020 PET111YMR257C 2403 nt1.04□□□□□ -2.24
FIR1P40020 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
FIR1P40020 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
FIR1P40020 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
FIR1P40020 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
FIR1P40020 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
FIR1P40020 snR50snR50 90 nt1.02□□□□□ -2.25
FIR1P40020 MYO1YHR023W 5787 nt1.01□□□□□ -2.25
FIR1P40020 YBL100W-BYBL100W-B 5313 nt1□□□□□ -2.25
FIR1P40020 BEM2YER155C 6504 nt0.95□□□□□ -2.26
FIR1P40020 IQG1YPL242C 4488 nt0.91□□□□□ -2.26
FIR1P40020 YJR029WYJR029W 5268 nt0.89□□□□□ -2.27
FIR1P40020 YPR137C-BYPR137C-B 5268 nt0.89□□□□□ -2.27
FIR1P40020 MLP1YKR095W 5628 nt0.88□□□□□ -2.27
FIR1P40020 YDL159W-AYDL159W-A 132 nt0.86□□□□□ -2.27
FIR1P40020 snR67snR67 82 nt0.85□□□□□ -2.27
FIR1P40020 SKI7YOR076C 2244 nt0.84□□□□□ -2.27
FIR1P40020 YLR149C-AYLR149C-A 87 nt0.83□□□□□ -2.28
FIR1P40020 tT(AGU)BtT(AGU)B 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)CtT(AGU)C 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)DtT(AGU)D 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)HtT(AGU)H 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)I1tT(AGU)I1 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)I2tT(AGU)I2 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)JtT(AGU)J 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)N1tT(AGU)N1 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)N2tT(AGU)N2 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)O1tT(AGU)O1 73 nt0.82□□□□□ -2.28
FIR1P40020 tT(AGU)O2tT(AGU)O2 73 nt0.82□□□□□ -2.28
FIR1P40020 THO2YNL139C 4794 nt0.81□□□□□ -2.28
FIR1P40020 MLP2YIL149C 5040 nt0.79□□□□□ -2.28
FIR1P40020 FMP27YLR454W 7887 nt0.76□□□□□ -2.29
FIR1P40020 YGR122C-AYGR122C-A 129 nt0.75□□□□□ -2.29
FIR1P40020 YOR186C-AYOR186C-A 210 nt0.71□□□□□ -2.3
FIR1P40020 YPR159C-AYPR159C-A 102 nt0.69□□□□□ -2.3
FIR1P40020 YER078W-AYER078W-A 165 nt0.68□□□□□ -2.3
FIR1P40020 YKL096C-BYKL096C-B 150 nt0.67□□□□□ -2.3
FIR1P40020 YML100W-AYML100W-A 174 nt0.65□□□□□ -2.31
FIR1P40020 SOV1YMR066W 2697 nt0.63□□□□□ -2.31
FIR1P40020 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
FIR1P40020 ESP1YGR098C 4893 nt0.61□□□□□ -2.31
FIR1P40020 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
FIR1P40020 YKL106C-AYKL106C-A 120 nt0.52□□□□□ -2.33
FIR1P40020 YOL013W-AYOL013W-A 192 nt0.4□□□□□ -2.35
FIR1P40020 tV(UAC)QtV(UAC)Q 76 nt0.39□□□□□ -2.35
FIR1P40020 YDL114W-AYDL114W-A 114 nt0.38□□□□□ -2.35
FIR1P40020 YOR376W-AYOR376W-A 156 nt0.38□□□□□ -2.35
FIR1P40020 snR75snR75 89 nt0.35□□□□□ -2.35
FIR1P40020 snR128snR128 126 nt0.34□□□□□ -2.36
FIR1P40020 YOR316C-AYOR316C-A 210 nt0.28□□□□□ -2.36
FIR1P40020 PAU9YBL108C-A 129 nt0.19□□□□□ -2.38
FIR1P40020 SBH2YER019C-A 267 nt0.16□□□□□ -2.38
FIR1P40020 snR77snR77 88 nt0.15□□□□□ -2.39
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms