Protein–RNA interactions for Protein: P38624

PRE3, Proteasome subunit beta type-1, yeastyeast

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRE3P38624 TRM732YMR259C 4263 nt1.87□□□□□ -2.11
PRE3P38624 MON2YNL297C 4911 nt1.86□□□□□ -2.11
PRE3P38624 PMD1YER132C 5262 nt1.86□□□□□ -2.11
PRE3P38624 NUP145YGL092W 3954 nt1.86□□□□□ -2.11
PRE3P38624 LAA1YJL207C 6045 nt1.85□□□□□ -2.11
PRE3P38624 CSF1YLR087C 8877 nt1.85□□□□□ -2.11
PRE3P38624 YOR093CYOR093C 4947 nt1.85□□□□□ -2.11
PRE3P38624 snR77snR77 88 nt1.83□□□□□ -2.12
PRE3P38624 NUP188YML103C 4968 nt1.8□□□□□ -2.12
PRE3P38624 SPP41YDR464W 4308 nt1.8□□□□□ -2.12
PRE3P38624 YNL284C-BYNL284C-B 5268 nt1.79□□□□□ -2.12
PRE3P38624 CDC39YCR093W 6327 nt1.76□□□□□ -2.13
PRE3P38624 DNF3YMR162C 4971 nt1.76□□□□□ -2.13
PRE3P38624 FKS1YLR342W 5631 nt1.76□□□□□ -2.13
PRE3P38624 MLP2YIL149C 5040 nt1.76□□□□□ -2.13
PRE3P38624 FAB1YFR019W 6837 nt1.75□□□□□ -2.13
PRE3P38624 TMA7YLR262C-A 195 nt1.75□□□□□ -2.13
PRE3P38624 SOV1YMR066W 2697 nt1.74□□□□□ -2.13
PRE3P38624 YMR247W-AYMR247W-A 144 nt1.74□□□□□ -2.13
PRE3P38624 VAM6YDL077C 3150 nt1.72□□□□□ -2.13
PRE3P38624 FIG2YCR089W 4830 nt1.7□□□□□ -2.14
PRE3P38624 YOR316C-AYOR316C-A 210 nt1.69□□□□□ -2.14
PRE3P38624 YGR130CYGR130C 2451 nt1.69□□□□□ -2.14
PRE3P38624 tT(UGU)HtT(UGU)H 72 nt1.68□□□□□ -2.14
PRE3P38624 YPR117WYPR117W 7470 nt1.67□□□□□ -2.14
PRE3P38624 SEC31YDL195W 3822 nt1.64□□□□□ -2.15
PRE3P38624 BST1YFL025C 3090 nt1.64□□□□□ -2.15
PRE3P38624 CFT1YDR301W 4074 nt1.63□□□□□ -2.15
PRE3P38624 SSK2YNR031C 4740 nt1.63□□□□□ -2.15
PRE3P38624 PEP1YBL017C 4740 nt1.63□□□□□ -2.15
PRE3P38624 SBH2YER019C-A 267 nt1.61□□□□□ -2.15
PRE3P38624 SPT7YBR081C 3999 nt1.6□□□□□ -2.15
PRE3P38624 YOR192C-BYOR192C-B 5313 nt1.59□□□□□ -2.16
PRE3P38624 VPS15YBR097W 4365 nt1.51□□□□□ -2.17
PRE3P38624 BRR2YER172C 6492 nt1.51□□□□□ -2.17
PRE3P38624 YMR272W-BYMR272W-B 108 nt1.48□□□□□ -2.17
PRE3P38624 BUD3YCL014W 4911 nt1.48□□□□□ -2.17
PRE3P38624 tC(GCA)QtC(GCA)Q 76 nt1.44□□□□□ -2.18
PRE3P38624 MEC1YBR136W 7107 nt1.42□□□□□ -2.18
PRE3P38624 RKR1YMR247C 4689 nt1.41□□□□□ -2.18
PRE3P38624 LTE1YAL024C 4308 nt1.37□□□□□ -2.19
PRE3P38624 IRA1YBR140C 9279 nt1.34□□□□□ -2.19
PRE3P38624 YML100W-AYML100W-A 174 nt1.31□□□□□ -2.2
PRE3P38624 YBL100W-BYBL100W-B 5313 nt1.31□□□□□ -2.2
PRE3P38624 tQ(UUG)E2tQ(UUG)E2 72 nt1.28□□□□□ -2.2
PRE3P38624 THO2YNL139C 4794 nt1.28□□□□□ -2.2
PRE3P38624 CCH1YGR217W 6120 nt1.26□□□□□ -2.21
PRE3P38624 RPL41BYDL133C-A 78 nt1.26□□□□□ -2.21
PRE3P38624 PAU24YBR301W 363 nt1.25□□□□□ -2.21
PRE3P38624 YOL014WYOL014W 375 nt1.22□□□□□ -2.21
PRE3P38624 HKR1YDR420W 5409 nt1.22□□□□□ -2.21
PRE3P38624 YKL145W-AYKL145W-A 93 nt1.18□□□□□ -2.22
PRE3P38624 ESP1YGR098C 4893 nt1.15□□□□□ -2.23
PRE3P38624 YOR335W-AYOR335W-A 81 nt1.14□□□□□ -2.23
PRE3P38624 tH(GUG)E1tH(GUG)E1 72 nt1.12□□□□□ -2.23
PRE3P38624 tH(GUG)E2tH(GUG)E2 72 nt1.12□□□□□ -2.23
PRE3P38624 tH(GUG)G1tH(GUG)G1 72 nt1.12□□□□□ -2.23
PRE3P38624 tH(GUG)G2tH(GUG)G2 72 nt1.12□□□□□ -2.23
PRE3P38624 tH(GUG)HtH(GUG)H 72 nt1.12□□□□□ -2.23
PRE3P38624 tH(GUG)KtH(GUG)K 72 nt1.12□□□□□ -2.23
PRE3P38624 tH(GUG)MtH(GUG)M 72 nt1.12□□□□□ -2.23
PRE3P38624 SCC2YDR180W 4482 nt1.11□□□□□ -2.23
PRE3P38624 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
PRE3P38624 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
PRE3P38624 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
PRE3P38624 snR58snR58 96 nt1.05□□□□□ -2.24
PRE3P38624 snR6snR6 112 nt1.05□□□□□ -2.24
PRE3P38624 YJL113WYJL113W 4647 nt1.01□□□□□ -2.25
PRE3P38624 IML1YJR138W 4755 nt1□□□□□ -2.25
PRE3P38624 PAU9YBL108C-A 129 nt0.99□□□□□ -2.25
PRE3P38624 YOR186C-AYOR186C-A 210 nt0.99□□□□□ -2.25
PRE3P38624 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
PRE3P38624 FMP27YLR454W 7887 nt0.99□□□□□ -2.25
PRE3P38624 DOP1YDR141C 5097 nt0.97□□□□□ -2.25
PRE3P38624 MLP1YKR095W 5628 nt0.97□□□□□ -2.25
PRE3P38624 BEM2YER155C 6504 nt0.93□□□□□ -2.26
PRE3P38624 IQG1YPL242C 4488 nt0.88□□□□□ -2.27
PRE3P38624 snR73snR73 106 nt0.88□□□□□ -2.27
PRE3P38624 EMT1tM(CAU)D 73 nt0.85□□□□□ -2.27
PRE3P38624 EMT5tM(CAU)J1 73 nt0.85□□□□□ -2.27
PRE3P38624 EMT3tM(CAU)J2 73 nt0.85□□□□□ -2.27
PRE3P38624 EMT4tM(CAU)M 73 nt0.85□□□□□ -2.27
PRE3P38624 EMT2tM(CAU)O2 73 nt0.85□□□□□ -2.27
PRE3P38624 YMR272W-AYMR272W-A 114 nt0.85□□□□□ -2.27
PRE3P38624 snR161snR161 161 nt0.78□□□□□ -2.28
PRE3P38624 snR128snR128 126 nt0.73□□□□□ -2.29
PRE3P38624 tA(UGC)QtA(UGC)Q 76 nt0.67□□□□□ -2.3
PRE3P38624 UTP10YJL109C 5310 nt0.65□□□□□ -2.3
PRE3P38624 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
PRE3P38624 UTP20YBL004W 7482 nt0.58□□□□□ -2.32
PRE3P38624 tT(AGU)BtT(AGU)B 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)CtT(AGU)C 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)DtT(AGU)D 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)HtT(AGU)H 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)I1tT(AGU)I1 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)I2tT(AGU)I2 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)JtT(AGU)J 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)N1tT(AGU)N1 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)N2tT(AGU)N2 73 nt0.54□□□□□ -2.32
PRE3P38624 tT(AGU)O1tT(AGU)O1 73 nt0.54□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 61.5 ms