Protein–RNA interactions for Protein: P38356

BSD2, Metal homeostatis protein BSD2, yeastyeast

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BSD2P38356 UTP20YBL004W 7482 nt1.55□□□□□ -2.16
BSD2P38356 DOP1YDR141C 5097 nt1.55□□□□□ -2.16
BSD2P38356 CDC39YCR093W 6327 nt1.53□□□□□ -2.16
BSD2P38356 YLR299C-AYLR299C-A 93 nt1.53□□□□□ -2.16
BSD2P38356 snR53snR53 91 nt1.53□□□□□ -2.16
BSD2P38356 EST1YLR233C 2100 nt1.52□□□□□ -2.17
BSD2P38356 ORC3YLL004W 1851 nt1.5□□□□□ -2.17
BSD2P38356 snR69snR69 101 nt1.49□□□□□ -2.17
BSD2P38356 IRA1YBR140C 9279 nt1.49□□□□□ -2.17
BSD2P38356 CSE1YGL238W 2883 nt1.48□□□□□ -2.17
BSD2P38356 SPC110YDR356W 2835 nt1.47□□□□□ -2.17
BSD2P38356 YDL159C-BYDL159C-B 177 nt1.47□□□□□ -2.17
BSD2P38356 snR64snR64 101 nt1.46□□□□□ -2.18
BSD2P38356 PET127YOR017W 2403 nt1.46□□□□□ -2.18
BSD2P38356 SIP4YJL089W 2490 nt1.45□□□□□ -2.18
BSD2P38356 YLL006W-AYLL006W-A 177 nt1.45□□□□□ -2.18
BSD2P38356 RDS3YPR094W 324 nt1.45□□□□□ -2.18
BSD2P38356 YPL060C-AYPL060C-A 3315 nt1.44□□□□□ -2.18
BSD2P38356 NST1YNL091W 3723 nt1.43□□□□□ -2.18
BSD2P38356 YJL077W-AYJL077W-A 87 nt1.43□□□□□ -2.18
BSD2P38356 tQ(UUG)E2tQ(UUG)E2 72 nt1.4□□□□□ -2.19
BSD2P38356 NIP1YMR309C 2439 nt1.37□□□□□ -2.19
BSD2P38356 BUL2YML111W 2763 nt1.36□□□□□ -2.19
BSD2P38356 YHR180C-BYHR180C-B 105 nt1.35□□□□□ -2.19
BSD2P38356 YKL225WYKL225W 348 nt1.35□□□□□ -2.19
BSD2P38356 YOL014WYOL014W 375 nt1.35□□□□□ -2.19
BSD2P38356 snR50snR50 90 nt1.35□□□□□ -2.19
BSD2P38356 SPT7YBR081C 3999 nt1.35□□□□□ -2.19
BSD2P38356 HKR1YDR420W 5409 nt1.33□□□□□ -2.2
BSD2P38356 RPL41AYDL184C 78 nt1.3□□□□□ -2.2
BSD2P38356 BUD3YCL014W 4911 nt1.3□□□□□ -2.2
BSD2P38356 YML054C-AYML054C-A 159 nt1.29□□□□□ -2.2
BSD2P38356 tQ(UUG)QtQ(UUG)Q 76 nt1.28□□□□□ -2.2
BSD2P38356 YBR109W-AYBR109W-A 225 nt1.28□□□□□ -2.2
BSD2P38356 YBR296C-AYBR296C-A 120 nt1.25□□□□□ -2.21
BSD2P38356 LTE1YAL024C 4308 nt1.22□□□□□ -2.21
BSD2P38356 SCC2YDR180W 4482 nt1.2□□□□□ -2.22
BSD2P38356 YMR160WYMR160W 2451 nt1.18□□□□□ -2.22
BSD2P38356 YER090C-AYER090C-A 90 nt1.16□□□□□ -2.22
BSD2P38356 YPR117WYPR117W 7470 nt1.14□□□□□ -2.23
BSD2P38356 snR38snR38 95 nt1.13□□□□□ -2.23
BSD2P38356 MLP2YIL149C 5040 nt1.13□□□□□ -2.23
BSD2P38356 YDR371C-AYDR371C-A 105 nt1.12□□□□□ -2.23
BSD2P38356 RKR1YMR247C 4689 nt1.12□□□□□ -2.23
BSD2P38356 YOR192C-BYOR192C-B 5313 nt1.11□□□□□ -2.23
BSD2P38356 YKL145W-AYKL145W-A 93 nt1.11□□□□□ -2.23
BSD2P38356 SKI7YOR076C 2244 nt1.1□□□□□ -2.23
BSD2P38356 AI1Q0050 2505 nt1.1□□□□□ -2.23
BSD2P38356 PET111YMR257C 2403 nt1.09□□□□□ -2.23
BSD2P38356 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
BSD2P38356 YLR149C-AYLR149C-A 87 nt1.02□□□□□ -2.25
BSD2P38356 BEM2YER155C 6504 nt1.01□□□□□ -2.25
BSD2P38356 MLP1YKR095W 5628 nt1.01□□□□□ -2.25
BSD2P38356 YDL159W-AYDL159W-A 132 nt1.01□□□□□ -2.25
BSD2P38356 YNL054W-BYNL054W-B 5250 nt1□□□□□ -2.25
BSD2P38356 snR67snR67 82 nt0.98□□□□□ -2.25
BSD2P38356 YKL096C-BYKL096C-B 150 nt0.97□□□□□ -2.25
BSD2P38356 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
BSD2P38356 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
BSD2P38356 YGR122C-AYGR122C-A 129 nt0.94□□□□□ -2.26
BSD2P38356 EMT1tM(CAU)D 73 nt0.92□□□□□ -2.26
BSD2P38356 EMT5tM(CAU)J1 73 nt0.92□□□□□ -2.26
BSD2P38356 EMT3tM(CAU)J2 73 nt0.92□□□□□ -2.26
BSD2P38356 EMT4tM(CAU)M 73 nt0.92□□□□□ -2.26
BSD2P38356 EMT2tM(CAU)O2 73 nt0.92□□□□□ -2.26
BSD2P38356 YBL100W-BYBL100W-B 5313 nt0.91□□□□□ -2.26
BSD2P38356 IQG1YPL242C 4488 nt0.9□□□□□ -2.26
BSD2P38356 THO2YNL139C 4794 nt0.89□□□□□ -2.27
BSD2P38356 tT(AGU)BtT(AGU)B 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)CtT(AGU)C 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)DtT(AGU)D 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)HtT(AGU)H 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)I1tT(AGU)I1 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)I2tT(AGU)I2 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)JtT(AGU)J 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)N1tT(AGU)N1 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)N2tT(AGU)N2 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)O1tT(AGU)O1 73 nt0.86□□□□□ -2.27
BSD2P38356 tT(AGU)O2tT(AGU)O2 73 nt0.86□□□□□ -2.27
BSD2P38356 YOR186C-AYOR186C-A 210 nt0.81□□□□□ -2.28
BSD2P38356 FMP27YLR454W 7887 nt0.79□□□□□ -2.28
BSD2P38356 snR75snR75 89 nt0.74□□□□□ -2.29
BSD2P38356 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
BSD2P38356 YKL106C-AYKL106C-A 120 nt0.7□□□□□ -2.3
BSD2P38356 YER078W-AYER078W-A 165 nt0.69□□□□□ -2.3
BSD2P38356 YML100W-AYML100W-A 174 nt0.64□□□□□ -2.31
BSD2P38356 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
BSD2P38356 MYO1YHR023W 5787 nt0.59□□□□□ -2.32
BSD2P38356 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
BSD2P38356 YDL114W-AYDL114W-A 114 nt0.57□□□□□ -2.32
BSD2P38356 ESP1YGR098C 4893 nt0.56□□□□□ -2.32
BSD2P38356 SOV1YMR066W 2697 nt0.5□□□□□ -2.33
BSD2P38356 tV(UAC)QtV(UAC)Q 76 nt0.47□□□□□ -2.33
BSD2P38356 snR128snR128 126 nt0.44□□□□□ -2.34
BSD2P38356 YOR376W-AYOR376W-A 156 nt0.42□□□□□ -2.34
BSD2P38356 YOR316C-AYOR316C-A 210 nt0.41□□□□□ -2.34
BSD2P38356 YOL013W-AYOL013W-A 192 nt0.37□□□□□ -2.35
BSD2P38356 PAU9YBL108C-A 129 nt0.35□□□□□ -2.35
BSD2P38356 SBH2YER019C-A 267 nt0.31□□□□□ -2.36
BSD2P38356 snR77snR77 88 nt0.28□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms