Protein–RNA interactions for Protein: P35209

SPT21, Protein SPT21, yeastyeast

Predictions only

Length 758 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT21P35209 MON2YNL297C 4911 nt2.35□□□□□ -2.03
SPT21P35209 PMD1YER132C 5262 nt2.33□□□□□ -2.04
SPT21P35209 BST1YFL025C 3090 nt2.31□□□□□ -2.04
SPT21P35209 YHR214C-BYHR214C-B 5382 nt2.31□□□□□ -2.04
SPT21P35209 YMR247W-AYMR247W-A 144 nt2.31□□□□□ -2.04
SPT21P35209 YNL284C-BYNL284C-B 5268 nt2.3□□□□□ -2.04
SPT21P35209 YMR160WYMR160W 2451 nt2.28□□□□□ -2.04
SPT21P35209 TMA7YLR262C-A 195 nt2.28□□□□□ -2.04
SPT21P35209 NUP192YJL039C 5052 nt2.27□□□□□ -2.05
SPT21P35209 CLU1YMR012W 3834 nt2.27□□□□□ -2.05
SPT21P35209 LAA1YJL207C 6045 nt2.26□□□□□ -2.05
SPT21P35209 SPC110YDR356W 2835 nt2.24□□□□□ -2.05
SPT21P35209 YOR093CYOR093C 4947 nt2.23□□□□□ -2.05
SPT21P35209 YGR130CYGR130C 2451 nt2.22□□□□□ -2.05
SPT21P35209 TRM732YMR259C 4263 nt2.2□□□□□ -2.06
SPT21P35209 YMR272W-BYMR272W-B 108 nt2.17□□□□□ -2.06
SPT21P35209 CDC39YCR093W 6327 nt2.17□□□□□ -2.06
SPT21P35209 SSK2YNR031C 4740 nt2.16□□□□□ -2.06
SPT21P35209 CFT1YDR301W 4074 nt2.14□□□□□ -2.07
SPT21P35209 tT(UGU)HtT(UGU)H 72 nt2.13□□□□□ -2.07
SPT21P35209 FKS1YLR342W 5631 nt2.12□□□□□ -2.07
SPT21P35209 SPT7YBR081C 3999 nt2.12□□□□□ -2.07
SPT21P35209 DNF3YMR162C 4971 nt2.1□□□□□ -2.07
SPT21P35209 HKR1YDR420W 5409 nt2.1□□□□□ -2.07
SPT21P35209 YNL054W-BYNL054W-B 5250 nt2.06□□□□□ -2.08
SPT21P35209 VAM6YDL077C 3150 nt2.06□□□□□ -2.08
SPT21P35209 FAB1YFR019W 6837 nt2.03□□□□□ -2.08
SPT21P35209 BUD3YCL014W 4911 nt2.02□□□□□ -2.09
SPT21P35209 PEP1YBL017C 4740 nt1.98□□□□□ -2.09
SPT21P35209 IRA1YBR140C 9279 nt1.95□□□□□ -2.1
SPT21P35209 YOR192C-BYOR192C-B 5313 nt1.94□□□□□ -2.1
SPT21P35209 CCH1YGR217W 6120 nt1.92□□□□□ -2.1
SPT21P35209 MYO1YHR023W 5787 nt1.91□□□□□ -2.1
SPT21P35209 YPR117WYPR117W 7470 nt1.9□□□□□ -2.1
SPT21P35209 LTE1YAL024C 4308 nt1.9□□□□□ -2.11
SPT21P35209 snR77snR77 88 nt1.9□□□□□ -2.11
SPT21P35209 MEC1YBR136W 7107 nt1.9□□□□□ -2.11
SPT21P35209 BRR2YER172C 6492 nt1.89□□□□□ -2.11
SPT21P35209 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
SPT21P35209 tQ(UUG)E2tQ(UUG)E2 72 nt1.84□□□□□ -2.11
SPT21P35209 YOR316C-AYOR316C-A 210 nt1.84□□□□□ -2.11
SPT21P35209 PAU24YBR301W 363 nt1.83□□□□□ -2.12
SPT21P35209 SBH2YER019C-A 267 nt1.74□□□□□ -2.13
SPT21P35209 RKR1YMR247C 4689 nt1.7□□□□□ -2.14
SPT21P35209 SCC2YDR180W 4482 nt1.62□□□□□ -2.15
SPT21P35209 DOP1YDR141C 5097 nt1.61□□□□□ -2.15
SPT21P35209 YJR029WYJR029W 5268 nt1.6□□□□□ -2.15
SPT21P35209 YPR137C-BYPR137C-B 5268 nt1.6□□□□□ -2.15
SPT21P35209 tH(GUG)E1tH(GUG)E1 72 nt1.59□□□□□ -2.15
SPT21P35209 tH(GUG)E2tH(GUG)E2 72 nt1.59□□□□□ -2.15
SPT21P35209 tH(GUG)G1tH(GUG)G1 72 nt1.59□□□□□ -2.15
SPT21P35209 tH(GUG)G2tH(GUG)G2 72 nt1.59□□□□□ -2.15
SPT21P35209 tH(GUG)HtH(GUG)H 72 nt1.59□□□□□ -2.15
SPT21P35209 tH(GUG)KtH(GUG)K 72 nt1.59□□□□□ -2.15
SPT21P35209 tH(GUG)MtH(GUG)M 72 nt1.59□□□□□ -2.15
SPT21P35209 YBL100W-BYBL100W-B 5313 nt1.56□□□□□ -2.16
SPT21P35209 IML1YJR138W 4755 nt1.51□□□□□ -2.17
SPT21P35209 MLP1YKR095W 5628 nt1.51□□□□□ -2.17
SPT21P35209 YML100W-AYML100W-A 174 nt1.49□□□□□ -2.17
SPT21P35209 tF(GAA)BtF(GAA)B 73 nt1.47□□□□□ -2.17
SPT21P35209 tF(GAA)FtF(GAA)F 73 nt1.47□□□□□ -2.17
SPT21P35209 tF(GAA)GtF(GAA)G 73 nt1.47□□□□□ -2.17
SPT21P35209 tF(GAA)H1tF(GAA)H1 73 nt1.47□□□□□ -2.17
SPT21P35209 tF(GAA)H2tF(GAA)H2 73 nt1.47□□□□□ -2.17
SPT21P35209 tF(GAA)MtF(GAA)M 73 nt1.47□□□□□ -2.17
SPT21P35209 tF(GAA)P1tF(GAA)P1 73 nt1.47□□□□□ -2.17
SPT21P35209 tF(GAA)P2tF(GAA)P2 73 nt1.47□□□□□ -2.17
SPT21P35209 SOV1YMR066W 2697 nt1.46□□□□□ -2.18
SPT21P35209 tV(UAC)BtV(UAC)B 74 nt1.45□□□□□ -2.18
SPT21P35209 tV(UAC)DtV(UAC)D 74 nt1.45□□□□□ -2.18
SPT21P35209 BEM2YER155C 6504 nt1.44□□□□□ -2.18
SPT21P35209 YOR186C-AYOR186C-A 210 nt1.39□□□□□ -2.19
SPT21P35209 YOL014WYOL014W 375 nt1.28□□□□□ -2.2
SPT21P35209 UTP20YBL004W 7482 nt1.23□□□□□ -2.21
SPT21P35209 PAU9YBL108C-A 129 nt1.21□□□□□ -2.22
SPT21P35209 ESP1YGR098C 4893 nt1.19□□□□□ -2.22
SPT21P35209 THO2YNL139C 4794 nt1.18□□□□□ -2.22
SPT21P35209 tC(GCA)QtC(GCA)Q 76 nt1.14□□□□□ -2.23
SPT21P35209 IQG1YPL242C 4488 nt1.09□□□□□ -2.23
SPT21P35209 YKL145W-AYKL145W-A 93 nt1.08□□□□□ -2.24
SPT21P35209 RPL41BYDL133C-A 78 nt1.06□□□□□ -2.24
SPT21P35209 FMP27YLR454W 7887 nt1.02□□□□□ -2.25
SPT21P35209 YJL113WYJL113W 4647 nt1.01□□□□□ -2.25
SPT21P35209 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
SPT21P35209 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
SPT21P35209 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
SPT21P35209 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
SPT21P35209 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
SPT21P35209 YPR159C-AYPR159C-A 102 nt0.98□□□□□ -2.25
SPT21P35209 YMR272W-AYMR272W-A 114 nt0.96□□□□□ -2.26
SPT21P35209 snR128snR128 126 nt0.96□□□□□ -2.26
SPT21P35209 UTP10YJL109C 5310 nt0.87□□□□□ -2.27
SPT21P35209 YOR335W-AYOR335W-A 81 nt0.84□□□□□ -2.27
SPT21P35209 snR161snR161 161 nt0.81□□□□□ -2.28
SPT21P35209 snR58snR58 96 nt0.8□□□□□ -2.28
SPT21P35209 tT(AGU)BtT(AGU)B 73 nt0.8□□□□□ -2.28
SPT21P35209 tT(AGU)CtT(AGU)C 73 nt0.8□□□□□ -2.28
SPT21P35209 tT(AGU)DtT(AGU)D 73 nt0.8□□□□□ -2.28
SPT21P35209 tT(AGU)HtT(AGU)H 73 nt0.8□□□□□ -2.28
SPT21P35209 tT(AGU)I1tT(AGU)I1 73 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms