Protein–RNA interactions for Protein: P32915

SEC61, Protein transport protein SEC61, yeastyeast

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC61P32915 SWI4YER111C 3282 nt2□□□□□ -2.09
SEC61P32915 CLU1YMR012W 3834 nt2□□□□□ -2.09
SEC61P32915 TRM732YMR259C 4263 nt1.98□□□□□ -2.09
SEC61P32915 NEO1YIL048W 3456 nt1.95□□□□□ -2.1
SEC61P32915 LAA1YJL207C 6045 nt1.94□□□□□ -2.1
SEC61P32915 NUP145YGL092W 3954 nt1.93□□□□□ -2.1
SEC61P32915 NUP188YML103C 4968 nt1.91□□□□□ -2.1
SEC61P32915 SEC31YDL195W 3822 nt1.88□□□□□ -2.11
SEC61P32915 CDC39YCR093W 6327 nt1.87□□□□□ -2.11
SEC61P32915 TMA7YLR262C-A 195 nt1.86□□□□□ -2.11
SEC61P32915 YHR214C-BYHR214C-B 5382 nt1.85□□□□□ -2.11
SEC61P32915 YOR093CYOR093C 4947 nt1.84□□□□□ -2.11
SEC61P32915 snR77snR77 88 nt1.84□□□□□ -2.11
SEC61P32915 FKS1YLR342W 5631 nt1.84□□□□□ -2.12
SEC61P32915 YNL284C-BYNL284C-B 5268 nt1.81□□□□□ -2.12
SEC61P32915 FAB1YFR019W 6837 nt1.78□□□□□ -2.12
SEC61P32915 VAM6YDL077C 3150 nt1.77□□□□□ -2.13
SEC61P32915 YGR130CYGR130C 2451 nt1.77□□□□□ -2.13
SEC61P32915 tT(UGU)HtT(UGU)H 72 nt1.76□□□□□ -2.13
SEC61P32915 YMR247W-AYMR247W-A 144 nt1.76□□□□□ -2.13
SEC61P32915 SOV1YMR066W 2697 nt1.75□□□□□ -2.13
SEC61P32915 CFT1YDR301W 4074 nt1.74□□□□□ -2.13
SEC61P32915 PEP1YBL017C 4740 nt1.72□□□□□ -2.13
SEC61P32915 MLP2YIL149C 5040 nt1.71□□□□□ -2.14
SEC61P32915 YOR316C-AYOR316C-A 210 nt1.7□□□□□ -2.14
SEC61P32915 SSK2YNR031C 4740 nt1.7□□□□□ -2.14
SEC61P32915 BST1YFL025C 3090 nt1.7□□□□□ -2.14
SEC61P32915 YPR117WYPR117W 7470 nt1.69□□□□□ -2.14
SEC61P32915 YMR272W-BYMR272W-B 108 nt1.69□□□□□ -2.14
SEC61P32915 DNF3YMR162C 4971 nt1.69□□□□□ -2.14
SEC61P32915 YOR192C-BYOR192C-B 5313 nt1.67□□□□□ -2.14
SEC61P32915 VPS15YBR097W 4365 nt1.65□□□□□ -2.14
SEC61P32915 SPT7YBR081C 3999 nt1.65□□□□□ -2.14
SEC61P32915 SBH2YER019C-A 267 nt1.62□□□□□ -2.15
SEC61P32915 BUD3YCL014W 4911 nt1.61□□□□□ -2.15
SEC61P32915 BRR2YER172C 6492 nt1.6□□□□□ -2.15
SEC61P32915 FIG2YCR089W 4830 nt1.6□□□□□ -2.15
SEC61P32915 RKR1YMR247C 4689 nt1.51□□□□□ -2.17
SEC61P32915 IRA1YBR140C 9279 nt1.5□□□□□ -2.17
SEC61P32915 MEC1YBR136W 7107 nt1.46□□□□□ -2.18
SEC61P32915 CCH1YGR217W 6120 nt1.45□□□□□ -2.18
SEC61P32915 LTE1YAL024C 4308 nt1.42□□□□□ -2.18
SEC61P32915 tQ(UUG)E2tQ(UUG)E2 72 nt1.42□□□□□ -2.18
SEC61P32915 tC(GCA)QtC(GCA)Q 76 nt1.38□□□□□ -2.19
SEC61P32915 HKR1YDR420W 5409 nt1.37□□□□□ -2.19
SEC61P32915 THO2YNL139C 4794 nt1.37□□□□□ -2.19
SEC61P32915 YBL100W-BYBL100W-B 5313 nt1.36□□□□□ -2.19
SEC61P32915 YML100W-AYML100W-A 174 nt1.34□□□□□ -2.19
SEC61P32915 PAU24YBR301W 363 nt1.31□□□□□ -2.2
SEC61P32915 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
SEC61P32915 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
SEC61P32915 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
SEC61P32915 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
SEC61P32915 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
SEC61P32915 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
SEC61P32915 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
SEC61P32915 RPL41BYDL133C-A 78 nt1.21□□□□□ -2.22
SEC61P32915 YJR029WYJR029W 5268 nt1.16□□□□□ -2.22
SEC61P32915 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
SEC61P32915 YKL145W-AYKL145W-A 93 nt1.16□□□□□ -2.22
SEC61P32915 ESP1YGR098C 4893 nt1.16□□□□□ -2.22
SEC61P32915 SCC2YDR180W 4482 nt1.16□□□□□ -2.22
SEC61P32915 YOL014WYOL014W 375 nt1.15□□□□□ -2.23
SEC61P32915 IML1YJR138W 4755 nt1.14□□□□□ -2.23
SEC61P32915 YOR335W-AYOR335W-A 81 nt1.14□□□□□ -2.23
SEC61P32915 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
SEC61P32915 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
SEC61P32915 snR6snR6 112 nt1.03□□□□□ -2.24
SEC61P32915 PAU9YBL108C-A 129 nt1.02□□□□□ -2.25
SEC61P32915 YOR186C-AYOR186C-A 210 nt1.02□□□□□ -2.25
SEC61P32915 DOP1YDR141C 5097 nt1.01□□□□□ -2.25
SEC61P32915 BEM2YER155C 6504 nt1□□□□□ -2.25
SEC61P32915 snR58snR58 96 nt0.98□□□□□ -2.25
SEC61P32915 MLP1YKR095W 5628 nt0.98□□□□□ -2.25
SEC61P32915 FMP27YLR454W 7887 nt0.97□□□□□ -2.25
SEC61P32915 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
SEC61P32915 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
SEC61P32915 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
SEC61P32915 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
SEC61P32915 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
SEC61P32915 IQG1YPL242C 4488 nt0.94□□□□□ -2.26
SEC61P32915 YJL113WYJL113W 4647 nt0.94□□□□□ -2.26
SEC61P32915 snR73snR73 106 nt0.85□□□□□ -2.27
SEC61P32915 YMR272W-AYMR272W-A 114 nt0.85□□□□□ -2.27
SEC61P32915 UTP20YBL004W 7482 nt0.8□□□□□ -2.28
SEC61P32915 snR161snR161 161 nt0.78□□□□□ -2.28
SEC61P32915 snR128snR128 126 nt0.73□□□□□ -2.29
SEC61P32915 UTP10YJL109C 5310 nt0.71□□□□□ -2.3
SEC61P32915 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
SEC61P32915 tF(GAA)BtF(GAA)B 73 nt0.68□□□□□ -2.3
SEC61P32915 tF(GAA)FtF(GAA)F 73 nt0.68□□□□□ -2.3
SEC61P32915 tF(GAA)GtF(GAA)G 73 nt0.68□□□□□ -2.3
SEC61P32915 tF(GAA)H1tF(GAA)H1 73 nt0.68□□□□□ -2.3
SEC61P32915 tF(GAA)H2tF(GAA)H2 73 nt0.68□□□□□ -2.3
SEC61P32915 tF(GAA)MtF(GAA)M 73 nt0.68□□□□□ -2.3
SEC61P32915 tF(GAA)P1tF(GAA)P1 73 nt0.68□□□□□ -2.3
SEC61P32915 tF(GAA)P2tF(GAA)P2 73 nt0.68□□□□□ -2.3
SEC61P32915 tA(UGC)QtA(UGC)Q 76 nt0.67□□□□□ -2.3
SEC61P32915 tT(AGU)BtT(AGU)B 73 nt0.6□□□□□ -2.31
SEC61P32915 tT(AGU)CtT(AGU)C 73 nt0.6□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms