Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 AC004264.1-201ENST00000608354 794 ntBASIC19.19■□□□□ 0.66
CCKBRP32239 AL353708.3-201ENST00000610272 989 ntBASIC19.19■□□□□ 0.66
CCKBRP32239 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCKBRP32239 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCKBRP32239 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCKBRP32239 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.19■□□□□ 0.66
CCKBRP32239 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCKBRP32239 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCKBRP32239 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCKBRP32239 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.18■□□□□ 0.66
CCKBRP32239 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCKBRP32239 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCKBRP32239 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.18■□□□□ 0.66
CCKBRP32239 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.18■□□□□ 0.66
CCKBRP32239 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CCKBRP32239 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCKBRP32239 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCKBRP32239 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.18■□□□□ 0.66
CCKBRP32239 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 HLA-G-202ENST00000376815 851 ntBASIC19.17■□□□□ 0.66
CCKBRP32239 HLA-G-203ENST00000376818 1127 ntBASIC19.17■□□□□ 0.66
CCKBRP32239 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.17■□□□□ 0.66
CCKBRP32239 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.17■□□□□ 0.66
CCKBRP32239 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.17■□□□□ 0.66
CCKBRP32239 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
CCKBRP32239 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.17■□□□□ 0.66
CCKBRP32239 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCKBRP32239 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CCKBRP32239 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCKBRP32239 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCKBRP32239 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 MMP23A-201ENST00000234610 1017 ntBASIC19.16■□□□□ 0.66
CCKBRP32239 RCN1P1-201ENST00000400413 996 ntBASIC19.16■□□□□ 0.66
CCKBRP32239 FAM197Y1-201ENST00000421178 764 ntBASIC19.16■□□□□ 0.66
CCKBRP32239 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.16■□□□□ 0.66
CCKBRP32239 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CCKBRP32239 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.16■□□□□ 0.66
CCKBRP32239 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.16■□□□□ 0.66
CCKBRP32239 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.16■□□□□ 0.66
CCKBRP32239 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.16■□□□□ 0.66
CCKBRP32239 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCKBRP32239 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCKBRP32239 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.15■□□□□ 0.66
CCKBRP32239 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 Z98882.1-201ENST00000622160 2253 ntBASIC19.15■□□□□ 0.66
CCKBRP32239 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.15■□□□□ 0.66
CCKBRP32239 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.15■□□□□ 0.66
CCKBRP32239 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.15■□□□□ 0.66
CCKBRP32239 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.15■□□□□ 0.66
CCKBRP32239 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCKBRP32239 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCKBRP32239 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCKBRP32239 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CCKBRP32239 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCKBRP32239 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCKBRP32239 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCKBRP32239 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCKBRP32239 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCKBRP32239 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.14■□□□□ 0.65
CCKBRP32239 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCKBRP32239 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.14■□□□□ 0.65
CCKBRP32239 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCKBRP32239 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.14■□□□□ 0.65
CCKBRP32239 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCKBRP32239 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCKBRP32239 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.14■□□□□ 0.65
CCKBRP32239 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.13■□□□□ 0.65
CCKBRP32239 NUDT16P1-203ENST00000513809 620 ntBASIC19.13■□□□□ 0.65
CCKBRP32239 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.13■□□□□ 0.65
CCKBRP32239 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.13■□□□□ 0.65
CCKBRP32239 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.13■□□□□ 0.65
CCKBRP32239 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCKBRP32239 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms