Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC13P31276 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC13P31276 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXC13P31276 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC13P31276 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC13P31276 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC13P31276 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXC13P31276 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 AC087499.1-201ENST00000418141 1075 ntBASIC20.69■□□□□ 0.9
HOXC13P31276 AC012618.2-201ENST00000428058 849 ntBASIC20.69■□□□□ 0.9
HOXC13P31276 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
HOXC13P31276 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC13P31276 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.69■□□□□ 0.9
HOXC13P31276 AC113410.3-201ENST00000623366 203 ntBASIC20.69■□□□□ 0.9
HOXC13P31276 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
HOXC13P31276 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC13P31276 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC13P31276 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXC13P31276 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXC13P31276 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC13P31276 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC13P31276 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
HOXC13P31276 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC13P31276 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC13P31276 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.68■□□□□ 0.9
HOXC13P31276 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.68■□□□□ 0.9
HOXC13P31276 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.68■□□□□ 0.9
HOXC13P31276 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HOXC13P31276 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HOXC13P31276 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HOXC13P31276 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.67■□□□□ 0.9
HOXC13P31276 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.67■□□□□ 0.9
HOXC13P31276 RCN1P1-201ENST00000400413 996 ntBASIC20.67■□□□□ 0.9
HOXC13P31276 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 AL355075.4-201ENST00000554988 638 ntBASIC20.67■□□□□ 0.9
HOXC13P31276 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.67■□□□□ 0.9
HOXC13P31276 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 KRT8P17-201ENST00000453110 1448 ntBASIC20.67■□□□□ 0.9
HOXC13P31276 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HOXC13P31276 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HOXC13P31276 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HOXC13P31276 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HOXC13P31276 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 KRASP1-201ENST00000407852 552 ntBASIC20.66■□□□□ 0.9
HOXC13P31276 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC13P31276 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXC13P31276 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HOXC13P31276 AC120498.8-201ENST00000614275 531 ntBASIC20.66■□□□□ 0.9
HOXC13P31276 KRT8P20-201ENST00000423953 1409 ntBASIC20.66■□□□□ 0.9
HOXC13P31276 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.66■□□□□ 0.9
HOXC13P31276 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC13P31276 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HOXC13P31276 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HOXC13P31276 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.66■□□□□ 0.9
HOXC13P31276 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
HOXC13P31276 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC13P31276 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC13P31276 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HOXC13P31276 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC13P31276 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
HOXC13P31276 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC13P31276 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC13P31276 BX119927.1-201ENST00000636596 1552 ntBASIC20.65■□□□□ 0.9
HOXC13P31276 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC13P31276 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms