Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC12P31275 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HOXC12P31275 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.68■□□□□ 0.42
HOXC12P31275 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HOXC12P31275 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HOXC12P31275 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.67■□□□□ 0.42
HOXC12P31275 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
HOXC12P31275 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HOXC12P31275 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.67■□□□□ 0.42
HOXC12P31275 C1QBPP2-201ENST00000528754 825 ntBASIC17.67■□□□□ 0.42
HOXC12P31275 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXC12P31275 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOXC12P31275 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.67■□□□□ 0.42
HOXC12P31275 Z99916.2-201ENST00000604037 246 ntBASIC17.67■□□□□ 0.42
HOXC12P31275 AC010331.1-201ENST00000611423 582 ntBASIC17.67■□□□□ 0.42
HOXC12P31275 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
HOXC12P31275 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HOXC12P31275 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.67■□□□□ 0.42
HOXC12P31275 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HOXC12P31275 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HOXC12P31275 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HOXC12P31275 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HOXC12P31275 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
HOXC12P31275 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC12P31275 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC12P31275 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HOXC12P31275 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC12P31275 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC12P31275 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC12P31275 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC12P31275 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HOXC12P31275 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC12P31275 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC12P31275 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.66■□□□□ 0.42
HOXC12P31275 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC12P31275 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.66■□□□□ 0.42
HOXC12P31275 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
HOXC12P31275 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HOXC12P31275 LINC01023-201ENST00000606054 436 ntBASIC17.66■□□□□ 0.42
HOXC12P31275 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC12P31275 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.66■□□□□ 0.42
HOXC12P31275 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC12P31275 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC12P31275 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC12P31275 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HOXC12P31275 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC12P31275 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.66■□□□□ 0.42
HOXC12P31275 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HOXC12P31275 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC12P31275 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 HLA-G-202ENST00000376815 851 ntBASIC17.65■□□□□ 0.42
HOXC12P31275 HLA-G-203ENST00000376818 1127 ntBASIC17.65■□□□□ 0.42
HOXC12P31275 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 KRT17P3-201ENST00000420566 1262 ntBASIC17.65■□□□□ 0.42
HOXC12P31275 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HOXC12P31275 RN7SL471P-201ENST00000580476 299 ntBASIC17.65■□□□□ 0.42
HOXC12P31275 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.65■□□□□ 0.42
HOXC12P31275 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.65■□□□□ 0.42
HOXC12P31275 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HOXC12P31275 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.64■□□□□ 0.42
HOXC12P31275 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HOXC12P31275 AC092720.2-201ENST00000602388 1665 ntBASIC17.64■□□□□ 0.42
HOXC12P31275 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.64■□□□□ 0.42
HOXC12P31275 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HOXC12P31275 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC12P31275 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.64■□□□□ 0.41
HOXC12P31275 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC12P31275 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC12P31275 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.64■□□□□ 0.41
HOXC12P31275 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.64■□□□□ 0.41
HOXC12P31275 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.64■□□□□ 0.41
HOXC12P31275 SNORA78-201ENST00000459373 127 ntBASIC17.64■□□□□ 0.41
HOXC12P31275 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC12P31275 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC12P31275 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HOXC12P31275 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms