Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB4P30926 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB4P30926 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB4P30926 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB4P30926 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB4P30926 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNB4P30926 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CHRNB4P30926 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
CHRNB4P30926 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB4P30926 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNB4P30926 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 AC244015.2-201ENST00000616358 1861 ntBASIC17.68■□□□□ 0.42
CHRNB4P30926 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB4P30926 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHRNB4P30926 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB4P30926 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB4P30926 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CHRNB4P30926 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.67■□□□□ 0.42
CHRNB4P30926 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB4P30926 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB4P30926 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB4P30926 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHRNB4P30926 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHRNB4P30926 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB4P30926 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHRNB4P30926 TMPOP1-202ENST00000424642 1267 ntBASIC17.66■□□□□ 0.42
CHRNB4P30926 NUDT16P1-203ENST00000513809 620 ntBASIC17.66■□□□□ 0.42
CHRNB4P30926 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNB4P30926 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNB4P30926 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNB4P30926 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CHRNB4P30926 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNB4P30926 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNB4P30926 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNB4P30926 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNB4P30926 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNB4P30926 LINC00565-201ENST00000562710 2331 ntBASIC17.65■□□□□ 0.42
CHRNB4P30926 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CHRNB4P30926 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNB4P30926 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 UNC93B2-201ENST00000285383 730 ntBASIC17.65■□□□□ 0.42
CHRNB4P30926 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNB4P30926 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHRNB4P30926 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHRNB4P30926 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNB4P30926 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNB4P30926 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.64■□□□□ 0.42
CHRNB4P30926 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNB4P30926 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNB4P30926 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNB4P30926 RNF165-205ENST00000588679 2904 ntBASIC17.64■□□□□ 0.41
CHRNB4P30926 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNB4P30926 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRNB4P30926 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRNB4P30926 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNB4P30926 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHRNB4P30926 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNB4P30926 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHRNB4P30926 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNB4P30926 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNB4P30926 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNB4P30926 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNB4P30926 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNB4P30926 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRNB4P30926 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms